CONREAL

CONREAL ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aataaagataataatactaaataacaataataagtaacatttattgagtgtttcctctgtattaggcactctctatgtactttctaaggtacagagcaag
          ||  ||   |  |  |                                                                                    
seq2      aaggaattaaccagaaaagtggg-----------------------------------------------------------------------------
                  10        20                                                                                

                 110       120       130       140       150       160       170       180       190       200
seq1      gtatgtgagaatctgggctgggataagcaacaagcataatggaaagctggaagcactggtttttgtcacaaagacctgggtttgaaatctggttccacac
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 210       220       230       240       250       260       270       280       290       300
seq1      attttctttgtctctttgagaatcagtgagctaccagggtcctagtatgcctgcaatgtttaacataaagtgtgtagaatgattaagctaatgtcaggca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 310       320       330       340       350       360       370       380       390       400
seq1      catagcagctgcctgatgatagcagtcacgtgttcatgttgcttccctcgtgtcaccaccaccaataatatcaacatcggcataatattaatagcaaaca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 410       420       430       440       450       460       470       480       490       500
seq1      ctggcacagtgcttaccacgtgccagaaaatggtttccgtttactaattcattgaatcctcaaaacaaacctacgtatgtactattttcatccccatctc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 510       520       530       540       550       560       570       580       590       600
seq1      acagatgagaaaactgaggcacagagattataaattgtccaaggtcacgcagctgtaaccgtaataaaaggaaagacgacctttaactgagcgcttacta
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 610       620       630       640       650       660       670       680       690       700
seq1      taatccacatctttaatgagctcgttacctacgttaactcttcacaataactccttaaagggtgtgcattatatctccactctacagatggggagactgt
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 710       720       730       740       750       760       770       780       790       800
seq1      ggctcagaattgcccatgggcgcaaagattccatcagggccgagcctgcactcactcagcctcccagatgcgacgaagcacgactccgctgtcagactcg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 810       820       830       840       850       860       870       880       890       900
seq1      aactccgcctcggggccccggggcgccgcctctctcccccggggcgccgcctctctcccccggggcgccgcctccctccgccgcggccgtcgagccgcgg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 910       920       930       940       950       960       970       980       990      1000
seq1      agcgcctcttccgcggagccgccgcctgccaggattccagcgccgcagctgcggccgcagccattggtctctgacgtcagcggcgtgcggcgcactcggc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1010      1020      1030      1040      1050      1060      1070      1080      1090      1100
seq1      acgtcatcgccgcgcgccggcttgccaggagctggagggggaggtaggcggggcggcgcgtgacctaaggcctctctgccgcgcgcgcaggtacggggca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
seq1      gaagtcgcaggtacccagctgctgcccacatttctggtccagagtcccgaaccccgagcactgggatgcctggctactccggtgggtgggcggcgctcgg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1210      1220      1230      1240      1250      1260      1270      1280      1290      1300
seq1      agcgcggggataccgaggggcgggcccccagcttagagcgtgacccgaccccgcctaatccttaggcgttcgcccaccatttcccagtcccgtagagctg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1310      1320      1330      1340      1350      1360      1370      1380      1390      1400
seq1      gggccagacaccgcacagccctagtgctgttaccagtcgctgcctgcgccccgggggctgcgcccagcagcttcctggcccttttccagccattagcgtc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1410      1420      1430      1440      1450      1460      1470      1480      1490      1500
seq1      cgttttccagccctgctgccccactgaggccccttcccacagcagtatcaccagccccagccccgcgttgttactattacttcccaggctaccagatcct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1510      1520      1530      1540      1550      1560      1570      1580      1590      1600
seq1      tttctgctcatgttccgacgtctcttcctactccagggccattattggtctcttctggacctttcagagataagagaggacctcggtagtgtagggccca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1610      1620      1630      1640      1650      1660      1670      1680      1690      1700
seq1      gtcctctgggaacaagggatggggagttttaggctgctgtccttggttccagtaacagagataccccctccacaggcacccaaatatgctccatagaata
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1710      1720      1730      1740      1750      1760      1770      1780      1790      1800
seq1      caatgagtgtggtcctgtggaggcccaatccaaaatatctagagctgagaagagatagagattttacaggccgtcaaatattcaatgggggtcgtctcta
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1810      1820      1830      1840      1850      1860      1870      1880      1890      1900
seq1      gagacttttaacaaactgtattgtgtacccacagattgcagaatggtgagcaaacatttgagaccatgttgctaaagcattaagcttggagaaagtgaca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1910      1920      1930                                                                      
seq1      gtaagAATTAGACAATAGTTTTGAAGTgaccaagaggt--------------------------------------------------------------
               | | |||| ||||| || | |   ||| | |||                                                              
seq2      -----ATTAAGACTATAGTCTTAATGAagccaggtggtggtggcgcacacttttaaccccagcacttgggaggcagagacagcctgagtctacagagtga
                    30        40        50        60        70        80        90       100       110       1

                                                                                                              
seq1      ----------------------------------------------------------------------------------------------------
                                                                                                              
seq2      gttccaggacagccagggctatacagagaaaccctgtctcgaaaaaacaaacaaacaaataaacaaaacaaaacaaagactatagatgaaaatgacggaa
          20       130       140       150       160       170       180       190       200       210       2

            1940      1950      1960      1970      1980      1990      2000      2010                        
seq1      ----TGTCACATggaaGAATTAGAccttgTTTTGTGTTTTCCTgcaGAGCGTTATCCAGACTagcgagtgggaggcaga---------------------
              |||||     ||| |||| |      ||| ||| || |  |  || |||||||| ||     | |  ||     |                     
seq2      ggctTGTCAAGGaaaaGGATTAAAtt---ATTTTTGTGTTTCCtccCAGTGTTATCCACACAgtgaaataagactgtcagaaaatttcagcctcgtggat
          20       230       240          250       260       270       280       290       300       310     

                   2020      2030      2040      2050      2060      2070      2080      2090      2100      2
seq1      ------TGTAAAAtctggaacgcagattttagtttgttggaaggagaaatgtaacatagtgAACCACGCATCTctggagggtgtaaagcagagacagcca
                | |||   |||                                             |||||   | ||||||  ||          ||  |   
seq2      agtaatTTTAATGcctg--------------------------------------------TACCACCTGTTTctggacagttctcttggaggagcgaag
            320       330                                                   340       350       360       370 

          110      2120      2130      2140      2150      2160      2170      2180      2190      2200      2
seq1      aggtaatttttggaaaagagtgcaggagagtagagtaaacgatgccagggttccttccgactctGAAATTCCGTGATACACTGAGCTGTCTTTCTCTTGt
          |   |   |  ||  |||| |        | ||                                  ||||| |||||||||||| |||||| | ||   
seq2      aatcagagtgaggccaagactcttttctggcag-------------------------------AGTATTCCATGATACACTGAGTTGTCTTCCCCTCT-
                380       390       400                                      410       420       430          

          210      2220      2230      2240      2250      2260      2270      2280      2290      2300      2
seq1      ggaagtttgaaagccatttGATAAAGTTCTCTTcattttttagaaatttgccctgctctggaattctgcatgttcaggttacttttggactgtCAAGATG
                             |  ||||||||||       |  |||      |   |  |   |||  ||                        |    ||
seq2      -------------------GTCAAAGTTCTCTCttgcactctgaagggctgcgcacattctgattaggctc----------------------CTGAGTG
                           440       450       460       470       480       490                             5

          310      2320      2330      2340      2350      2360      2370      2380      2390      2400      2
seq1      ACAGTTCCTTAATTTGGGTTCCATTATTaccacagcaactggtttatttgtatagctGTCCACACCTAGagcattttcaccctgtcatttGATTTTATCt
           |||||||||||||| ||  |||||             |                      ||||| ||  | || |   |  ||| |     |||  ||
seq2      CCAGTTCCTTAATTTTGGGACCATTTGActggtgtggtc------------------CCTTACACCCAGtaccttctacactcgtcgtc-TGGTTTCCCt
          00       510       520       530                         540       550       560        570       58

          410      2420      2430      2440      2450      2460      2470      2480      2490      2500      2
seq1      tccgtgaagcttgtggtgtgtttcccttaactgttcgagaaactaaagccctTACTCTGAAGTCTCTGCAAGCCTCCCTCTTTGATtttgaagcatgatt
          || |  |||||  |      |       ||                        || |||||| ||||| | ||   ||||||   ||  ||     |  
seq2      tctgcaaagctattttctgctgaaaaaaaaaaaaag----------------GCCTTTGAAGTATCTGCTACCCGAACTCTTTTTAttctaaaacacaag
          0       590       600       610                       620       630       640       650       660   

          510      2520      2530      2540      2550      2560      2570      2580      2590       2600      
seq1      gtcaccctcaCAGAAAGCTCTTTTGAAATATAccatTCGTTTAATCCTGCTGGGTCACATGCTCTCTCACGAGTTGCTGAAATAT-CTATTCCTtgtgtt
           |        | ||| |||  |||||||   |    |   || | |||  |||||||||||     ||||  ||| |||||| |    |||| |||| ||
seq2      ct--------CTGAAGGCTGCTTTGAAACCAAgtg-TTTATTGAACCTTGTGGGTCACATGAGTGGTCACAGGTTTCTGAAAGAAtTGATTCTTtgtttt
                      670       680       690        700       710       720       730       740       750    

          2610      2620      2630      2640      2650      2660      2670      2680      2690      2700      
seq1      tatttcagagccaaggcactgatgtttgaactggaaacttcaaaacgtttaataagagtcttcaggatgggtttgaactagacaagctagaaatttcttt
          |  |        |       |    |     ||       |        |    |   | |  || |      || |        |   | |       |
seq2      tcctcagagctgagatactggtgtgtgtgtgtgtgtgtgacctgggaactttggaccttttgaagaaactcactggatggctttggactgtacacaaagt
             760       770       780       790       800       810       820       830       840       850    

          2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      
seq1      agaacaccagctctagcatgcatctcccacttttggctttcctggagaggagcttgaagaggtggttctgcagacagccacagtgatacttaggaaacca
             | | |   ||          || ||  |   |  |          |  |    |     |||    |        || | |      |||  | |||
seq2      cagagatcctatcagaagctgccctgcccatccagcatgcttctccttgctgtggcactccctgggggggagttggaacagattccagtgtagacagcca
             860       870       880       890       900       910       920       930       940       950    

          2810      2820      2830      2840      2850      2860      2870      2880      2890                
seq1      gaggaatggatttgacttttctgctaggattctctgttatagtttctccctgagttgtaagaggcatggaaatatacatgaaac-----------TGAAG
           |   |||    |||        |   |||  |    |  |  |  |||       ||               |    || |               | |
seq2      tacagatgctcctgaaagcagctcacagatggttgagttaatctagtccacctccagtcctcctggacttgtcagcagtgcagagatacttctggAAAGG
             960       970       980       990      1000      1010      1020      1030      1040      1050    

           2900      2910      2920      2930      2940      2950      2960      2970      2980      2990     
seq1      AACCTGCAAGGAAGGGAAGTGGAACTTtcCATGCTGAGTGAAAACTAACCAAGtggcagttgtgactgaaaacactgaaacctACCACGtccagATTCAC
          |||||||   |||||||||| |   ||| |||  ||| | || | | | |||| |||||     ||    |             ||||  |  |  ||||
seq2      AACCTGCCCCGAAGGGAAGTTGCCTTTt-CATATTGATTCAAGAGTGAACAAGaggcagaaaccacctggatgg---------TCCACAcctggCATCAC
            1060      1070      1080       1090      1100      1110      1120               1130      1140    

           3000      3010      3020      3030      3040      3050      3060      3070      3080      3090  
seq1      TGGATTGGgggatagaggaacggtcacagctagggagaAAGAAGTGAtaccggaaaagaaaacCTAAATGAAGAGAATGAGGatgactgcacagtag
          ||   |||||     ||    ||                |||| || | |  | ||  | |  | | |||||||| |||| |    ||| | |||| 
seq2      TGAGCTGGggacaccagttgggggaca-----------GAGAACTGCttctaggaagaaca--CCAGATGAAGAGGATGAAGccatctggagagtaa
            1150      1160      1170                 1180      1190        1200      1210      1220        

CONREAL ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M0010156.7619061912243014.7864.9420.890.90CdxA C only
M0010056.7619061912243013.9814.0800.800.81CdxA C only
MA007758.9719101918283619.4206.5480.900.81SOX-9C only
MA007861.54191119192937210.0525.5110.950.80SOX17C only
MA007764.1019131921313927.7996.5480.850.81SOX-9C only
M0039664.8619151921333914.7483.9680.870.82En-1 C only
M00402*62.5019181927364525.1356.5380.800.85Pro onlyC only
M00801*61.111939194422322816.5584.6720.890.81Pro onlyC L
MA006757.891939194622323015.9466.4940.880.90Pax-2C L
MA008958.331940194522422925.3004.4270.850.81TCF11-MafGC L
M00498*55.261951195823524215.3943.9650.870.82Pro onlyC L
MA007554.291952195623624019.1245.9371.000.87S8C L
M0016054.761964197524525627.5317.8120.830.83SRY C only
M00473*57.501967197624825729.1105.5160.900.80Pro onlyC only
M0014854.051967197324825427.8654.7860.950.83SRY C only
MA008058.331972197725325825.3084.2640.860.81SPI-1C only
M0020358.541981199126227227.7496.5300.860.82GATA-X C L
M0034757.501984199326527427.9556.8710.840.80GATA-1 C L
M00462*57.501984199326527426.2086.2940.870.88Pro onlyC L
M0010156.761984199026527123.3673.4470.830.84CdxA C L
M00789*56.761985199126627226.4666.4660.870.87Pro onlyC L
M0039656.761985199126627214.0634.0630.830.83En-1 C L
MA008955.561985199026627124.9254.9250.830.83TCF11-MafGC L
M0010156.761986199226727312.9162.9160.810.81CdxA C L
MA003755.561986199126727225.0175.0170.860.86GATA-3C L
MA003555.561986199126727224.6424.6420.870.87GATA-1C L
MA009855.561987199226827315.8965.8960.910.91c-ETSC L
MA003654.291987199126827226.6516.6511.001.00GATA-2C L
M00690*50.001989199627027715.3316.8410.830.89Pro onlyC only
M0010051.352014202032232824.2464.1920.820.81CdxA C only
M0012350.002069208033334416.9879.1650.800.86c-Myc/Max C L
M00751*58.332070207533433926.3466.3460.830.83Pro onlyC L
M0027158.332070207533433926.1016.1010.850.85AML-1a C L
M00935*62.502172218140541426.1536.6940.800.82Pro onlyC L M
M00500*63.162173218040641314.0154.7000.810.83Pro onlyC L M
M00499*63.162173218040641315.8346.5480.890.92Pro onlyC L M
M00493*63.162173218040641317.5016.2060.940.88Pro onlyC L M
M00496*63.162173218040641316.1905.6500.900.87Pro onlyC L M
M00494*63.162173218040641317.2726.1500.920.87Pro onlyC L M
M00497*63.162173218040641316.9255.9880.950.90Pro onlyC L M
M00750*62.162173217940641227.6336.2160.920.86Pro onlyC L M
M0010164.862174218040741315.0234.2000.900.87CdxA C L M
M00704*63.892174217940741225.1175.1170.820.82Pro onlyC L M
M0026067.502175218440841717.4356.8540.830.81HLF C L M
MA009863.892175218040841316.1424.6440.920.85c-ETSC L M
MA006765.792178218541141827.5176.9480.940.92Pax-2C L M
M00462*65.002179218841242115.0485.9880.830.86Pro onlyC L M
M0007665.002179218841242115.4575.2200.850.84GATA-2 C L M
M0007565.002179218841242116.2765.5090.880.85GATA-1 C L M
M00925*66.672180218841342116.0526.6130.820.83Pro onlyC L M
MA009965.792180218741342017.3486.2440.850.82c-FOSC L M
MA003766.672181218641441915.1255.1250.860.86GATA-3C L M
MA003566.672181218641441915.4395.4390.910.91GATA-1C L M
MA003665.712181218541441815.7785.7780.950.95GATA-2C L M
M00789*64.862181218741442015.5695.5690.840.84Pro onlyC L M
M00468*70.272184219041742325.7985.7980.860.86Pro onlyC L M
MA003268.422184219141742425.5015.5010.890.89FREAC-3C L M
M0025368.422184219141742425.1245.1240.910.91cap C L M
M00314*68.422186219341942626.1815.4650.890.85Pro onlyC L M
M00313*68.422186219341942625.9855.2750.880.85Pro onlyC L M
M00315*68.422186219341942625.9055.5960.880.87Pro onlyC L M
M00792*71.792190219842343127.8805.3900.950.84Pro onlyC L M
MA008066.672197220243043524.7218.5790.830.99SPI-1C L
M00658*63.162197220443043727.70610.3670.870.95Pro onlyC L
MA003960.002197220643043928.1236.3400.900.84GklfC only
MA008162.162198220443143726.3228.9120.860.95SPI-BC L
M00486*51.282227223544044815.8175.2520.880.85Pro onlyC L M
M00921*50.002230223744345015.7525.7520.830.83Pro onlyC L M
M00500*50.002231223844445114.6984.6980.830.83Pro onlyC L M
M00499*50.002231223844445116.4756.4750.920.92Pro onlyC L M
M00493*50.002231223844445115.4025.4020.850.85Pro onlyC L M
M00496*50.002231223844445114.6034.6030.830.83Pro onlyC L M
M00494*50.002231223844445114.4834.4830.800.80Pro onlyC L M
M00497*50.002231223844445115.0835.0830.860.86Pro onlyC L M
MA008052.782233223844645124.6444.6440.830.83SPI-1C L M
MA003752.782234223944745224.0874.0870.820.82GATA-3C L M
M00747*51.352234224044745319.6095.5650.950.80Pro onlyC L
M0025355.262301230849249924.9164.0330.900.86cap C L
M0041957.142303231449450518.1154.8300.900.81MEIS1 C L
M00773*58.542304231449550517.9139.7790.900.97Pro onlyC L
M00913*56.412306231449750528.0428.0420.950.95Pro onlyC L M
M00314*55.262306231349750414.5924.9060.810.83Pro onlyC L M
M00313*55.262306231349750414.4464.7580.810.82Pro onlyC L M
M00315*55.262306231349750414.3154.8790.800.83Pro onlyC L M
M0018360.002307231649850726.7347.7230.860.90c-Myb C L M
M0025360.532308231549950614.9794.9520.900.90cap C L M
M0007458.142308232049951126.9426.7820.840.83c-Ets-1(p54) C L M
M00975*61.542309231750050814.9394.9390.810.81Pro onlyC L M
M00492*60.532309231650050715.7515.7510.820.82Pro onlyC L M
M00500*60.532309231650050716.0616.0610.880.88Pro onlyC L M
M00498*60.532309231650050713.9993.9990.820.82Pro onlyC L M
M00499*60.532309231650050716.8106.8100.940.94Pro onlyC L M
M00493*60.532309231650050716.7986.7980.910.91Pro onlyC L M
M00496*60.532309231650050715.7565.7560.880.88Pro onlyC L M
M00494*60.532309231650050716.6006.6000.890.89Pro onlyC L M
M00497*60.532309231650050716.4426.4420.930.93Pro onlyC L M
M00960*60.002309231850050925.8455.8450.810.81Pro onlyC L M
M00971*63.162310231750150817.2117.2110.860.86Pro onlyC L M
M00655*62.162310231650150716.2986.2980.850.85Pro onlyC L M
M00621*57.142310232150151226.5646.5640.810.81Pro onlyC L M
M0014864.862311231750250824.2344.2340.800.80SRY C L M
MA008063.892311231650250727.3327.3320.940.94SPI-1C L M
MA009863.892311231650250715.9775.9770.920.92c-ETSC L M
M00658*63.162311231850250925.9655.9650.810.81Pro onlyC L M
M0022860.002311232050251117.2057.2050.810.81VBP C L M
M0026060.002311232050251117.4797.4790.830.83HLF C L M
M00436*57.142311232250251327.6987.6980.820.82Pro onlyC L M
M00912*57.142311232250251316.9866.9860.840.84Pro onlyC L M
M00770*57.142311232250251327.2627.2620.870.87Pro onlyC L M
MA008164.862312231850350927.3217.3210.890.89SPI-BC L M
M0010164.862314232050551124.8624.8620.890.89CdxA C L M
M0010064.862314232050551124.5894.5890.830.83CdxA C L M
M00690*63.162314232150551215.7575.7570.850.85Pro onlyC L M
M00314*63.162314232150551214.8734.8730.830.83Pro onlyC L M
M00313*63.162314232150551214.9014.9010.830.83Pro onlyC L M
M00315*63.162314232150551214.6854.6850.820.82Pro onlyC L M
M0039561.542314232250551314.5734.5730.850.85HOXA3 C L M
M0010164.862315232150651213.1483.1480.820.82CdxA C L M
M0010164.862315232150651224.3434.3430.870.87CdxA C L M
M0010064.862315232150651225.2115.2110.870.87CdxA C L M
M00318*63.162315232250651327.5587.5580.830.83Pro onlyC L M
M0024163.162315232250651318.4288.4280.890.89Nkx2-5 C L M
M0039561.542315232350651415.3045.3040.890.89HOXA3 C L M
M00747*64.862316232250751315.6575.6570.810.81Pro onlyC L M
MA006364.862316232250751317.7407.7400.940.94NkxC L M
M0014864.862316232250751324.4124.4120.810.81SRY C L M
MA007565.712317232150851229.1249.1241.001.00S8C L M
M00486*58.972317232550851625.2814.4600.860.82Pro onlyC L M
M00690*60.532318232550951628.5705.7570.950.85Pro onlyC L M
MA002753.662323233351452425.8464.6600.860.81EN-1C only
MA009552.782327233251852316.2257.0270.890.93Yin-YangC L M
M0025350.002328233551952614.6363.3470.890.83cap C only
M01019*50.002365237653854929.7537.1440.890.82Pro onlyC L
M00486*51.282398240657057824.1705.6190.810.87Pro onlyC only
M00496*50.002399240657157815.1127.5290.850.95Pro onlyC only
M0025357.892460246761662324.3892.8540.880.81cap C only
M01022*55.002460246961662526.25311.0610.800.96Pro onlyC only
M00978*58.542461247161762717.89311.5860.830.93Pro onlyC only
M00671*57.892461246861762416.35610.9530.821.00Pro onlyC only
M00805*61.112462246761862325.7169.6620.831.00Pro onlyC only
M00792*58.972464247262062827.2784.6090.930.80Pro onlyC only
M00500*57.892464247162062724.9334.6720.840.83Pro onlyC only
M00498*57.892464247162062725.7975.2330.890.87Pro onlyC only
M0014760.002465247462163015.7837.2800.810.87HSF2 C only
M0003957.892465247262162817.1996.8210.830.82CREB C only
M0025360.532469247662563223.2473.8480.830.85cap C L
MA011158.542472248262863827.1898.3210.800.83Spz1C L
M00706*61.5424802488636644211.5986.2611.000.80Pro onlyC L
M00486*51.282485249364164925.6954.2590.870.81Pro onlyC L
M00500*52.632518252566667325.4864.7750.860.83Pro onlyC L
M00498*52.632518252566667326.6624.3690.920.83Pro onlyC L
M00770*59.522525253667368417.6985.8630.890.82Pro onlyC L
M00622*55.812527253967568728.1127.2360.830.80Pro onlyC L
M00671*55.262527253467568217.52010.4850.860.98Pro onlyC L M
M00805*55.562528253367668125.9409.6620.841.00Pro onlyC L M
M00500*57.892530253767868524.5455.0340.830.84Pro onlyC L
M00498*57.892530253767868526.6626.6620.920.92Pro onlyC L
M00494*57.892530253767868527.5844.8760.940.82Pro onlyC L
M00964*54.762544255569170225.7409.1230.820.90Pro onlyC only
M0039556.412553256170070814.0744.4970.820.85HOXA3 C M
M0025355.262553256070070723.4672.6820.840.80cap C M
M00924*54.762553256470071126.9177.4120.820.84Pro onlyC M
M0018858.542556256670371327.2927.1240.820.81AP-1 C M
M0017258.542556256670371327.4967.3040.840.83AP-1 C M
M0017458.542556256670371328.1307.3210.860.83AP-1 C M
M00925*58.972557256570471228.7638.2680.900.89Pro onlyC M
M00964*61.902558256970571615.1665.1660.800.80Pro onlyC L M
M00986*61.112558256370571014.9184.9180.860.86Pro onlyC L M
MA009960.532558256570571228.1418.1410.880.88c-FOSC L M
M00926*60.532558256570571218.4738.4730.900.90Pro onlyC L M
M0012165.9125592572706719110.1228.0580.860.82USF C L M
M0012165.9125592572706719210.1228.0580.860.82USF C L M
M0012265.912559257270671919.4027.8920.900.86USF C L M
M0012265.912559257270671929.4027.8920.900.86USF C L M
M00796*64.2925602571707718210.3448.2100.890.84Pro onlyC L M
M0022063.412560257070771718.88310.2830.820.86SREBP-1 C L M
MA006763.162560256770771415.2445.2440.850.85Pax-2C L M
MA005862.502560256970771617.5428.3450.830.86MaxC L M
M00684*62.502560256970771626.4067.9550.830.89Pro onlyC L M
M01008*61.542560256870771528.2748.2740.890.89Pro onlyC L M
M00801*61.112560256570771215.8605.8600.860.86Pro onlyC L M
M0022065.852561257170871828.5818.4390.820.81SREBP-1 C L M
M0018765.002561257070871718.0908.7090.860.88USF C L M
MA008963.892561256670871325.3005.3000.850.85TCF11-MafGC L M
M01029*65.792562256970971629.89111.8930.931.00Pro onlyC L M
M0021765.792562256970971618.4737.9670.910.89USF C L M
M0021765.792562256970971626.1377.0840.820.86USF C L M
M0025365.792562256970971614.9474.0620.900.86cap C L M
MA009364.862562256870971527.8007.8000.870.87USFC L M
M01008*69.232563257171071818.3787.6730.890.87Pro onlyC L M
MA000466.672563256871071516.1126.1120.830.83ARNTC L M
MA000466.672563256871071526.1126.1120.830.83ARNTC L M
MA010466.672563256871071517.4187.4180.880.88n-MYCC L M
MA010466.672563256871071526.8196.8190.860.86n-MYCC L M
M00726*66.672563256871071514.7014.7010.820.82Pro onlyC L M
M00726*66.672563256871071526.9706.9700.940.94Pro onlyC L M
MA010366.672563256871071514.6334.6330.820.82deltaEF1C L M
M00796*64.292572258371973028.6198.2550.850.84Pro onlyC L M
M0018767.502573258272072917.6708.1160.850.86USF C L M
M00912*59.522579259072673725.8466.3330.810.82Pro onlyC L M
M00770*59.522579259072673715.3245.6790.800.82Pro onlyC L M
M0025360.532580258772773424.9854.6960.900.89cap C L M
M00486*56.412584259273173914.1265.7240.810.87Pro onlyC L M
M00498*55.262584259173173825.7974.3690.890.83Pro onlyC L M
M0010054.052584259073173725.2154.7060.870.84CdxA C L M
M00500*50.002593260074174815.4554.0800.860.81Pro onlyC only
M00498*50.002593260074174816.3975.5330.910.88Pro onlyC only
M00499*50.002593260074174816.5914.8980.930.85Pro onlyC only
M00493*50.002593260074174816.7536.0570.910.88Pro onlyC only
M00494*50.002593260074174816.3635.2470.880.84Pro onlyC only
M00497*50.002593260074174816.0554.8930.910.85Pro onlyC only
M00658*50.00289128981050105717.4996.5550.860.83Pro onlyC only
M00500*52.63289329001052105924.0925.1520.810.85Pro onlyC L M
M00499*52.63289329001052105925.2434.6020.870.84Pro onlyC L M
M00497*52.63289329001052105924.1125.8340.820.90Pro onlyC L M
MA008050.00289328981052105714.2497.3320.810.94SPI-1C L M
M0014752.50289429031053106215.4776.0140.800.82HSF2 C L M
M0014752.50289429031053106225.4395.5940.800.81HSF2 C L M
MA010355.56289629011055106015.4875.4870.850.85deltaEF1C L M
MA008066.67290429091063106818.1845.0290.980.85SPI-1C L M
M00498*63.16290429111063107025.5333.8040.880.81Pro onlyC L M
MA005760.00290529141064107316.3765.6980.820.80MZF_5-13C L M
M0007455.81290529171064107616.5617.7660.830.86c-Ets-1(p54) C L M
M00747*64.86290729131066107227.2507.2500.870.87Pro onlyC L M
MA008164.86290729131066107216.4936.4930.860.86SPI-BC L M
M00658*63.16290729141066107316.6936.6930.830.83Pro onlyC L M
MA009866.67290829131067107223.6583.6580.810.81c-ETSC L M
M00986*66.67290829131067107215.3925.3920.880.88Pro onlyC L M
M00971*63.16290829151067107427.7107.7100.880.88Pro onlyC L M
MA008063.89290929141068107318.5798.5790.990.99SPI-1C L M
MA009863.89290929141068107325.7775.7770.910.91c-ETSC L M
M00655*62.16290929151068107426.8266.8260.870.87Pro onlyC L M
M00492*60.532909291610681075210.4777.6700.990.88Pro onlyC L M
M00500*60.53290929161068107528.4208.4200.960.96Pro onlyC L M
M00499*60.53290929161068107527.0076.4530.940.92Pro onlyC L M
M00493*60.53290929161068107525.3885.2270.850.84Pro onlyC L M
M00496*60.53290929161068107526.4926.0150.910.89Pro onlyC L M
M00494*60.53290929161068107524.4504.5070.800.80Pro onlyC L M
M00497*60.53290929161068107527.8907.1980.990.96Pro onlyC L M
M0039659.46291129171070107614.8475.1850.870.89En-1 C L M
M00967*51.28291429221073108125.9857.1970.830.87Pro onlyC only
M0025357.89292529321083109025.3313.7900.920.85cap C L M
M00983*58.542927293710851095111.3377.9470.920.83Pro onlyC L M
M0019958.97292929371087109526.9527.2560.820.83AP-1 C L M
MA009957.89292929361087109415.9896.8750.810.84c-FOSC L M
MA003758.33293029351088109314.0244.1590.820.82GATA-3C L M
M00724*63.41293629461094110425.7907.9230.810.86Pro onlyC L M
M00473*57.50293929481097110616.1147.2000.820.85Pro onlyC L M
M00751*52.78297929841128113326.3466.5020.830.84Pro onlyC L M
M0027152.78297929841128113326.1016.0200.850.85AML-1a C L M
MA006752.63299029971139114615.5036.3690.860.89Pax-2C L M
M00468*51.35299129971140114625.1685.1680.830.83Pro onlyC L M
M0025350.00299129981140114722.6104.9980.800.90cap C L M
M0025350.00299229991141114814.1963.6990.870.85cap C L
M0025352.63299630031145115222.7603.6210.810.84cap C L
M00500*50.00303430411172117927.6644.6980.940.83Pro onlyC only
MA008050.00303430391172117715.1014.6440.850.83SPI-1C only
M00499*50.00303430411172117928.0727.0290.990.95Pro onlyC only
M00493*50.00303430411172117924.8785.5620.820.86Pro onlyC only
M00496*50.00303430411172117924.5375.0800.830.85Pro onlyC only
M00497*50.00303430411172117925.1145.7750.860.89Pro onlyC only
M0025350.00303530421173118025.9595.5090.940.92cap C only
M0025350.00305930661195120224.2824.4840.870.88cap C L
MA003955.00306130701197120617.2596.0220.870.83GklfC L M
M00747*54.05306130671197120329.7015.6570.960.81Pro onlyC L M
M00801*58.33306330681199120425.0265.0260.830.83Pro onlyC L M
MA008058.33306330681199120414.8324.8320.840.84SPI-1C L M
M00500*57.89306330701199120625.6035.6030.860.86Pro onlyC L M
M00498*57.89306330701199120624.6684.6680.850.85Pro onlyC L M
M00499*57.89306330701199120624.1514.1510.820.82Pro onlyC L M
M00747*59.46306630721202120829.6096.6820.950.84Pro onlyC L M
M00962*64.10306730751203121116.3285.1480.870.82Pro onlyC L M
M0025363.16306830751204121126.7766.3300.980.96cap C L M
MA008966.67307130761207121215.2644.4560.850.81TCF11-MafGC L M
M00801*63.89307230771208121325.0265.0260.830.83Pro onlyC L M

LAGAN

LAGAN ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aataaagataataatactaaataacaataataagtaacatttattgagtgtttcctctgtattaggcactctctatgtactttctaaggtacagagcaag
          ||  ||                                                                                              
seq2      aaggaa----------------------------------------------------------------------------------------------
                                                                                                              

                 110       120       130       140       150       160       170       180       190       200
seq1      gtatgtgagaatctgggctgggataagcaacaagcataatggaaagctggaagcactggtttttgtcacaaagacctgggtttgaaatctggttccacac
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 210       220       230       240       250       260       270       280       290       300
seq1      attttctttgtctctttgagaatcagtgagctaccagggtcctagtatgcctgcaatgtttaacataaagtgtgtagaatgattaagctaatgtcaggca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 310       320       330       340       350       360       370       380       390       400
seq1      catagcagctgcctgatgatagcagtcacgtgttcatgttgcttccctcgtgtcaccaccaccaataatatcaacatcggcataatattaatagcaaaca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 410       420       430       440       450       460       470       480       490       500
seq1      ctggcacagtgcttaccacgtgccagaaaatggtttccgtttactaattcattgaatcctcaaaacaaacctacgtatgtactattttcatccccatctc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 510       520       530       540       550       560       570       580       590       600
seq1      acagatgagaaaactgaggcacagagattataaattgtccaaggtcacgcagctgtaaccgtaataaaaggaaagacgacctttaactgagcgcttacta
              |  |||||| || |    |||                           || ||  | |||| ||                                
seq2      -ttaaccagaaaagtgggattaaga---------------------------ctatagtcttaatgaa--------------------------------
             10        20        30                                   40                                      

                 610       620       630       640       650       660       670       680       690       700
seq1      taatccacatctttaatgagctcgttacctacgttaactcttcacaataactccttaaagggtgtgcattatatctccactctacagatggggagactgt
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 710       720       730       740       750       760       770       780       790       800
seq1      ggctcagaattgcccatgggcgcaaagattccatcagggccgagcctgcactcactcagcctcccagatgcgacgaagcacgactccgctgtcagactcg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 810       820       830       840       850       860       870       880       890       900
seq1      aactccgcctcggggccccggggcgccgcctctctcccccggggcgccgcctctctcccccggggcgccgcctccctccgccgcggccgtcgagccgcgg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 910       920       930       940       950       960       970       980       990      1000
seq1      agcgcctcttccgcggagccgccgcctgccaggattccagcgccgcagctgcggccgcagccattggtctctgacgtcagcggcgtgcggcgcactcggc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1010      1020      1030      1040      1050      1060      1070      1080      1090      1100
seq1      acgtcatcgccgcgcgccggcttgccaggagctggagggggaggtaggcggggcggcgcgtgacctaaggcctctctgccgcgcgcgcaggtacggggca
                                 |||||| | ||| || |                                                            
seq2      -----------------------gccaggtggtggtggcg------------------------------------------------------------
                                   50        60                                                               

                1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
seq1      gaagtcgcaggtacccagctgctgcccacatttctggtccagagtcccgaaccccgagcactgggatgcctggctactccggtgggtgggcggcgctcgg
                                    |||| || |   ||                                                  | || || ||
seq2      --------------------------cacacttttaaccc--------------------------------------------------cagcacttgg
                                         70                                                          80       

                1210      1220      1230      1240      1250      1260      1270      1280      1290      1300
seq1      agcgcggggataccgaggggcgggcccccagcttagagcgtgacccgaccccgcctaatccttaggcgttcgcccaccatttcccagtcccgtagagctg
             || | || | |            |  ||  || || ||||                                            ||| | | |||  
seq2      gaggcagagacagc------------ctgagtctacagagtgagt------------------------------------------tccaggacagcca
           90       100                   110       120                                                 130   

                1310      1320      1330      1340      1350      1360      1370      1380      1390      1400
seq1      gggccagacaccgcacagccctagtgctgttaccagtcgctgcctgcgccccgggggctgcgcccagcagcttcctggcccttttccagccattagcgtc
          |||| | |||                                                                                          
seq2      gggctataca------------------------------------------------------------------------------------------
              140                                                                                             

                1410      1420      1430      1440      1450      1460      1470      1480      1490      1500
seq1      cgttttccagccctgctgccccactgaggccccttcccacagcagtatcaccagccccagccccgcgttgttactattacttcccaggctaccagatcct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1510      1520      1530      1540      1550      1560      1570      1580      1590      1600
seq1      tttctgctcatgttccgacgtctcttcctactccagggccattattggtctcttctggacctttcagagataagagaggacctcggtagtgtagggccca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1610      1620      1630      1640      1650      1660      1670             1680      1690   
seq1      gtcctctgggaacaagggatggggagttttaggctgctgtccttggttccagtaacagagataccccctcc-------acaggcacccaaatatgctcca
                                                                   |||| ||||  ||        |||  ||  ||||||  |   |
seq2      ---------------------------------------------------------gagaaaccctgtctcgaaaaaacaaacaaacaaataaacaaaa
                                                                       150       160       170       180      

             1700      1710      1720      1730      1740      1750      1760      1770      1780      1790   
seq1      tagaatacaatgagtgtggtcctgtggaggcccaatccaaaatatctagagctgagaagagatagagattttacaggccgtcaaatattcaatgggggtc
           | || | |                                            ||  | ||||  | ||                               
seq2      caaaacaaa--------------------------------------------gactatagatgaaaat-------------------------------
           190                                                   200       210                                

             1800      1810      1820      1830      1840      1850      1860      1870      1880      1890   
seq1      gtctctagagacttttaacaaactgtattgtgtacccacagattgcagaatggtgagcaaacatttgagaccatgttgctaaagcattaagcttggagaa
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

             1900      1910      1920      1930      1940      1950      1960      1970      1980      1990   
seq1      agtgacagtaagaattagacaatagttttgaagtgaccaagaggtTGTCACATggaaGAATTAGAccttgTTTTGTGTTTTCCtgcaGAGCGTTATCCAG
                                            |||  |  | ||||||     ||| |||| |   | |||||||||| |      || |||||||| 
seq2      ----------------------------------gacggaaggctTGTCAAGGaaaaGGATTAAAttat-TTTTGTGTTTCCTcc--CAGTGTTATCCAC
                                                  220       230       240        250       260         270    

             2000      2010      2020      2030      2040      2050      2060      2070      2080      2090   
seq1      actagcgagtgggaggcagatgtaaaatctggaacgcagattttagtttgttggaaggagaaatgtaacatagtgAACCACGCATCTctggagggtgtaa
          ||     ||||  |      ||| | |          | |||| ||  |  ||||   || ||| | |     || |||||   | ||||||        
seq2      ac-----agtgaaataagactgtcaga----------aaatttcagcctcgtggat--agtaattttaatgcctgTACCACCTGTTTctgga--------
                  280       290                 300       310         320       330       340                 

             2100      2110      2120      2130      2140      2150      2160      2170      2180      2190   
seq1      agcagagacagccaaggtaatttttggaaaagagtgcaggagagtagagtaaacgatgccagggttccttccgactctGAAATTCCGTGATACACTGAGC
                            | || |     | ||| | || |    ||       || |||| |  || || |         ||||| |||||||||||| 
seq2      -----------------cagttctcttggaggagcgaagaatcagag------tgaggccaagactcttttctggcagAGTATTCCATGATACACTGAGT
                         350       360       370             380       390       400       410       420      

             2200      2210      2220      2230      2240      2250      2260      2270      2280      2290   
seq1      TGTCTTTCTCTtgtggaagtttgaaagccatttGATAAAGTTCTCTTcattttttagaaatttgccctgctctggaattctgcatgttcaggttactttt
          |||||| | ||                     ||  ||||||||||       |  |||               |   |  |||  ||| | |||   | 
seq2      TGTCTTCCCCTc--------------------tGTCAAAGTTCTCTCttgcactctgaa---------------gggctgcgcacattctgattaggctc
           430                           440       450       460                      470       480       490 

             2300      2310      2320      2330      2340      2350      2360      2370      2380      2390   
seq1      ggactgtCAAGATGACAGTTCCTTAATTTGGGtTCCATTattaccacagcaactggtttatttgtatagctGTCCACACCTAGagcattttcaccctgtc
                 |    || |||||||||||||| ||  |||||                  | | | || | |      ||||| ||  | || |   |  |||
seq2      -------CTGAGTGCCAGTTCCTTAATTTTGGgACCATT------------------tgactggtgtggtcCCTTACACCCAGtaccttctacactcgtc
                       500       510       520                         530       540       550       560      

             2400      2410      2420      2430      2440      2450      2460      2470      2480      2490   
seq1      atttgattttatcttccgtgaagcttgtggtgtgtttcccttaactgttcgagaaactaaagcccttactctgaaGTCTCTGCAAGCCTCCCTCTTTGAT
           | || |||   |||| |  |||||  |            |   |||    | |||  || ||| ||     ||||| ||||| | ||   ||||||   
seq2      gtctggtttc-ccttctgcaaagctatt-----------ttctgctgaaaaaaaaaaaaaggccttt-----gaaGTATCTGCTACCCGAACTCTTTTTA
           570        580       590                  600       610       620            630       640       65

             2500      2510      2520      2530      2540      2550      2560      2570      2580      2590   
seq1      tttgaagcatgattgtcaccctcaCAGAAAGCTCTTTTGAAATATAccattcgtttaatcctgcTGGGTCACATGCTCTCTCACGAGTTGCTGAAATATc
          ||  ||          |||   | | ||| |||  |||||||   |   ||  || || | || |||||||||||     ||||  ||| |||||| |  
seq2      ttctaaaa--------cacaagctCTGAAGGCTGCTTTGAAACCAAgtgtttattgaaccttg-TGGGTCACATGAGTGGTCACAGGTTTCTGAAAGAAt
          0               660       670       680       690       700        710       720       730       740

             2600      2610      2620      2630                  2640      2650      2660      2670      2680 
seq1      tattCCTTGTGTTTATTTCAGAGCCaaGGCACTGATGTttg------------aaCTGGAAACTTcaaaacgtttaataagagtcttCAGGATGGGTTTG
          |  | |||   |||   |||||||  ||  |||| ||| ||            | |||| |||||   | | ||| |  | | ||  | |||||| ||||
seq2      tgatTCTTTGTTTTTCCTCAGAGCTgaGATACTGGTGTgtgtgtgtgtgtgtgacCTGGGAACTTtggaccttttgaagaaactca-CTGGATGGCTTTG
                 750       760       770       780       790       800       810       820        830       84

               2690         2700      2710            2720      2730      2740       2750      2760      2770 
seq1      AACtagaca---agctagaaatttctttagaa------caccagctcTAGCATGCATctCCCACTTTTGgc-TTTCCTGGAGAGGAGCTTGAAGAGgtGG
           |||  |||   ||  ||| ||    | ||||      |  |   || ||||||| |||||    | ||||  | ||||| | |||| | ||| || |  
seq2      GACtgtacacaaagtcagagatcctatcagaagctgccctgcccatcCAGCATGCTTctCCTTGCTGTGgcaCTCCCTGGGGGGGAGTTGGAACAGatTC
          0       850       860       870       880       890       900       910       920       930       94

               2780      2790      2800      2810      2820      2830      2840      2850      2860      2870 
seq1      TTCTGCAGACAGCCACAGTGATACTTAGGAAACCAgaggaatggatttgacttttctgctaggattctctgttatagtttctccctgagttgtaagaggc
             || ||||||||| |  ||| ||   |||| |||   |        ||   ||  | ||   |  ||         | ||||  || |||| ||  | 
seq2      CAGTGTAGACAGCCATACAGATGCTCCTGAAAGCAgctca------cagatggttgagttaatctagtccacctccagtcctcctggacttgtcagcagt
          0       950       960       970             980       990      1000      1010      1020      1030   

               2880      2890      2900      2910      2920      2930      2940      2950      2960      2970 
seq1      atggaaatatacatgaaactgAAGAACCTGCAAGGAAGGGAAGTGGaactttcCATGCTGAGTGAAAACTAACCAAGtggcagttgtgactgaaaacact
             || |||    || ||   | ||||||||   |||||||||| |  |||| |||  ||| | || | | | |||| |||||         ||| ||| 
seq2      gcagagatacttctggaa---AGGAACCTGCCCCGAAGGGAAGTTGc-cttttCATATTGATTCAAGAGTGAACAAGaggcag---------aaaccacc
             1040      1050         1060      1070       1080      1090      1100      1110               1120

               2980      2990      3000      3010      3020      3030      3040      3050      3060      3070 
seq1      gaaacctACCACGtccagATTCACTGGATTGGgggatagaggaacggtcacagctagggagaaagaagtgataccggaaaagaaaacCTAAATGAAGAGA
             |    ||||  |  |  ||||||   |||||              |||   | ||| || |||           |  |  ||  | | |||||||| 
seq2      tggatggTCCACAcctggCATCACTGAGCTGGgga-------------caccagttgggggacagagaactgcttctaggaagaacaCCAGATGAAGAGG
                1130      1140      1150                   1160      1170      1180      1190      1200      1

               3080      3090  
seq1      ATGAGGatgactgcacagtag
          |||| |    ||| | |||| 
seq2      ATGAAGccatctggagagtaa
          210      1220        

LAGAN ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00801*61.111939194422322816.5584.6720.890.81Pro onlyL C
MA006757.891939194622323015.9466.4940.880.90Pax-2L C
MA008958.331940194522422925.3004.4270.850.81TCF11-MafGL C
M00498*55.261951195823524215.3943.9650.870.82Pro onlyL C
MA007554.291952195623624019.1245.9371.000.87S8L C
M0010054.051964197024725314.9474.9470.850.85CdxA L only
M00972*51.221964197424725727.4777.6330.810.81Pro onlyL only
M0014851.351965197124825424.7864.7860.830.83SRY L only
M00473*50.001965197424825726.6215.5160.830.80Pro onlyL only
M00731*52.631965197224825527.7797.7790.860.86Pro onlyL only
MA000251.281965197324825617.9447.9440.870.87AML-1L only
MA008451.281965197324825626.7546.7540.840.84SRYL only
M0014851.351967197325025627.8657.8650.950.95SRY L only
M0027152.781967197225025515.3305.3300.830.83AML-1a L only
M00473*50.001967197625025929.1106.3940.900.83Pro onlyL only
M00751*52.781967197225025516.3466.3460.830.83Pro onlyL only
MA003350.001967197425025724.9934.3360.830.80FREAC-7L only
M0039651.351968197425125714.0634.0630.830.83En-1 L only
M00486*51.281968197625125925.3836.7390.860.92Pro onlyL only
MA003150.001968197525125826.7216.7210.810.81FREAC-4L only
M0020358.541981199126227227.7496.5300.860.82GATA-X L C
M0010156.761984199026527123.3673.4470.830.84CdxA L C
M0034757.501984199326527427.9556.8710.840.80GATA-1 L C
M00462*57.501984199326527426.2086.2940.870.88Pro onlyL C
M0039656.761985199126627214.0634.0630.830.83En-1 L C
M00789*56.761985199126627226.4666.4660.870.87Pro onlyL C
MA008955.561985199026627124.9254.9250.830.83TCF11-MafGL C
M0010156.761986199226727312.9162.9160.810.81CdxA L C
MA003555.561986199126727224.6424.6420.870.87GATA-1L C
MA003755.561986199126727225.0175.0170.860.86GATA-3L C
MA003654.291987199126827226.6516.6511.001.00GATA-2L C
MA009855.561987199226827315.8965.8960.910.91c-ETSL C
M0012350.002069208033334416.9879.1650.800.86c-Myc/Max L C
M0027158.332070207533433926.1016.1010.850.85AML-1a L C
M00751*58.332070207533433926.3466.3460.830.83Pro onlyL C
M00935*62.502172218140541426.1536.6940.800.82Pro onlyL C M
M00493*63.162173218040641317.5016.2060.940.88Pro onlyL C M
M00494*63.162173218040641317.2726.1500.920.87Pro onlyL C M
M00496*63.162173218040641316.1905.6500.900.87Pro onlyL C M
M00497*63.162173218040641316.9255.9880.950.90Pro onlyL C M
M00499*63.162173218040641315.8346.5480.890.92Pro onlyL C M
M00500*63.162173218040641314.0154.7000.810.83Pro onlyL C M
M00750*62.162173217940641227.6336.2160.920.86Pro onlyL C M
M0010164.862174218040741315.0234.2000.900.87CdxA L C M
M00704*63.892174217940741225.1175.1170.820.82Pro onlyL C M
M0026067.502175218440841717.4356.8540.830.81HLF L C M
MA009863.892175218040841316.1424.6440.920.85c-ETSL C M
MA006765.792178218541141827.5176.9480.940.92Pax-2L C M
M0007565.002179218841242116.2765.5090.880.85GATA-1 L C M
M0007665.002179218841242115.4575.2200.850.84GATA-2 L C M
M00462*65.002179218841242115.0485.9880.830.86Pro onlyL C M
M00925*66.672180218841342116.0526.6130.820.83Pro onlyL C M
MA009965.792180218741342017.3486.2440.850.82c-FOSL C M
M00789*64.862181218741442015.5695.5690.840.84Pro onlyL C M
MA003566.672181218641441915.4395.4390.910.91GATA-1L C M
MA003665.712181218541441815.7785.7780.950.95GATA-2L C M
MA003766.672181218641441915.1255.1250.860.86GATA-3L C M
M0025368.422184219141742425.1245.1240.910.91cap L C M
M00468*70.272184219041742325.7985.7980.860.86Pro onlyL C M
MA003268.422184219141742425.5015.5010.890.89FREAC-3L C M
M00313*68.422186219341942625.9855.2750.880.85Pro onlyL C M
M00314*68.422186219341942626.1815.4650.890.85Pro onlyL C M
M00315*68.422186219341942625.9055.5960.880.87Pro onlyL C M
M00792*71.792190219842343127.8805.3900.950.84Pro onlyL C M
M00658*63.162197220443043727.70610.3670.870.95Pro onlyL C
MA008066.672197220243043524.7218.5790.830.99SPI-1L C
MA008162.162198220443143726.3228.9120.860.95SPI-BL C
M00486*51.282227223544044815.8175.2520.880.85Pro onlyL C M
M00921*50.002230223744345015.7525.7520.830.83Pro onlyL C M
M00493*50.002231223844445115.4025.4020.850.85Pro onlyL C M
M00494*50.002231223844445114.4834.4830.800.80Pro onlyL C M
M00496*50.002231223844445114.6034.6030.830.83Pro onlyL C M
M00497*50.002231223844445115.0835.0830.860.86Pro onlyL C M
M00499*50.002231223844445116.4756.4750.920.92Pro onlyL C M
M00500*50.002231223844445114.6984.6980.830.83Pro onlyL C M
MA008052.782233223844645124.6444.6440.830.83SPI-1L C M
M00747*51.352234224044745319.6095.5650.950.80Pro onlyL C
MA003752.782234223944745224.0874.0870.820.82GATA-3L C M
M0025355.262301230849249924.9164.0330.900.86cap L C
M0041957.142303231449450518.1154.8300.900.81MEIS1 L C
M00773*58.542304231449550517.9139.7790.900.97Pro onlyL C
M00313*55.262306231349750414.4464.7580.810.82Pro onlyL C M
M00314*55.262306231349750414.5924.9060.810.83Pro onlyL C M
M00315*55.262306231349750414.3154.8790.800.83Pro onlyL C M
M00913*56.412306231449750528.0428.0420.950.95Pro onlyL C M
M0018360.002307231649850726.7347.7230.860.90c-Myb L C M
M0007458.142308232049951126.9426.7820.840.83c-Ets-1(p54) L C M
M0025360.532308231549950614.9794.9520.900.90cap L C M
M00492*60.532309231650050715.7515.7510.820.82Pro onlyL C M
M00493*60.532309231650050716.7986.7980.910.91Pro onlyL C M
M00494*60.532309231650050716.6006.6000.890.89Pro onlyL C M
M00496*60.532309231650050715.7565.7560.880.88Pro onlyL C M
M00497*60.532309231650050716.4426.4420.930.93Pro onlyL C M
M00498*60.532309231650050713.9993.9990.820.82Pro onlyL C M
M00499*60.532309231650050716.8106.8100.940.94Pro onlyL C M
M00500*60.532309231650050716.0616.0610.880.88Pro onlyL C M
M00960*60.002309231850050925.8455.8450.810.81Pro onlyL C M
M00975*61.542309231750050814.9394.9390.810.81Pro onlyL C M
M00621*57.142310232150151226.5646.5640.810.81Pro onlyL C M
M00655*62.162310231650150716.2986.2980.850.85Pro onlyL C M
M00971*63.162310231750150817.2117.2110.860.86Pro onlyL C M
M0014864.862311231750250824.2344.2340.800.80SRY L C M
M0022860.002311232050251117.2057.2050.810.81VBP L C M
M0026060.002311232050251117.4797.4790.830.83HLF L C M
M00436*57.142311232250251327.6987.6980.820.82Pro onlyL C M
M00658*63.162311231850250925.9655.9650.810.81Pro onlyL C M
M00770*57.142311232250251327.2627.2620.870.87Pro onlyL C M
M00912*57.142311232250251316.9866.9860.840.84Pro onlyL C M
MA008063.892311231650250727.3327.3320.940.94SPI-1L C M
MA009863.892311231650250715.9775.9770.920.92c-ETSL C M
MA008164.862312231850350927.3217.3210.890.89SPI-BL C M
M0010064.862314232050551124.5894.5890.830.83CdxA L C M
M0010164.862314232050551124.8624.8620.890.89CdxA L C M
M00313*63.162314232150551214.9014.9010.830.83Pro onlyL C M
M00314*63.162314232150551214.8734.8730.830.83Pro onlyL C M
M00315*63.162314232150551214.6854.6850.820.82Pro onlyL C M
M0039561.542314232250551314.5734.5730.850.85HOXA3 L C M
M00690*63.162314232150551215.7575.7570.850.85Pro onlyL C M
M0010064.862315232150651225.2115.2110.870.87CdxA L C M
M0010164.862315232150651213.1483.1480.820.82CdxA L C M
M0010164.862315232150651224.3434.3430.870.87CdxA L C M
M0024163.162315232250651318.4288.4280.890.89Nkx2-5 L C M
M00318*63.162315232250651327.5587.5580.830.83Pro onlyL C M
M0039561.542315232350651415.3045.3040.890.89HOXA3 L C M
M0014864.862316232250751324.4124.4120.810.81SRY L C M
M00747*64.862316232250751315.6575.6570.810.81Pro onlyL C M
MA006364.862316232250751317.7407.7400.940.94NkxL C M
M00486*58.972317232550851625.2814.4600.860.82Pro onlyL C M
MA007565.712317232150851229.1249.1241.001.00S8L C M
M00690*60.532318232550951628.5705.7570.950.85Pro onlyL C M
MA009552.782327233251852316.2257.0270.890.93Yin-YangL C M
M01019*50.002365237653854929.7537.1440.890.82Pro onlyL C
M0025360.532469247662563223.2473.8480.830.85cap L C
MA011158.542472248262863827.1898.3210.800.83Spz1L C
M00706*61.5424802488636644211.5986.2611.000.80Pro onlyL C
M00486*51.282485249364164925.6954.2590.870.81Pro onlyL C
M00498*52.632518252566667326.6624.3690.920.83Pro onlyL C
M00500*52.632518252566667325.4864.7750.860.83Pro onlyL C
M00770*59.522525253667368417.6985.8630.890.82Pro onlyL C
M00622*55.812527253967568728.1127.2360.830.80Pro onlyL C
M00671*55.262527253467568217.52010.4850.860.98Pro onlyL C M
M00805*55.562528253367668125.9409.6620.841.00Pro onlyL C M
M00494*57.892530253767868527.5844.8760.940.82Pro onlyL C
M00498*57.892530253767868526.6626.6620.920.92Pro onlyL C
M00500*57.892530253767868524.5455.0340.830.84Pro onlyL C
M00926*60.532558256570571218.4738.4730.900.90Pro onlyL C M
M00964*61.902558256970571615.1665.1660.800.80Pro onlyL C M
M00986*61.112558256370571014.9184.9180.860.86Pro onlyL C M
MA009960.532558256570571228.1418.1410.880.88c-FOSL C M
M0012165.9125592572706719110.1228.0580.860.82USF L C M
M0012165.9125592572706719210.1228.0580.860.82USF L C M
M0012265.912559257270671919.4027.8920.900.86USF L C M
M0012265.912559257270671929.4027.8920.900.86USF L C M
M0022063.412560257070771718.88310.2830.820.86SREBP-1 L C M
M00684*62.502560256970771626.4067.9550.830.89Pro onlyL C M
M00796*64.2925602571707718210.3448.2100.890.84Pro onlyL C M
M00801*61.112560256570771215.8605.8600.860.86Pro onlyL C M
M01008*61.542560256870771528.2748.2740.890.89Pro onlyL C M
MA005862.502560256970771617.5428.3450.830.86MaxL C M
MA006763.162560256770771415.2445.2440.850.85Pax-2L C M
M0018765.002561257070871718.0908.7090.860.88USF L C M
M0022065.852561257170871828.5818.4390.820.81SREBP-1 L C M
MA008963.892561256670871325.3005.3000.850.85TCF11-MafGL C M
M0021765.792562256970971618.4737.9670.910.89USF L C M
M0021765.792562256970971626.1377.0840.820.86USF L C M
M0025365.792562256970971614.9474.0620.900.86cap L C M
M01029*65.792562256970971629.89111.8930.931.00Pro onlyL C M
MA009364.862562256870971527.8007.8000.870.87USFL C M
M00726*66.672563256871071514.7014.7010.820.82Pro onlyL C M
M00726*66.672563256871071526.9706.9700.940.94Pro onlyL C M
M01008*69.232563257171071818.3787.6730.890.87Pro onlyL C M
MA000466.672563256871071516.1126.1120.830.83ARNTL C M
MA000466.672563256871071526.1126.1120.830.83ARNTL C M
MA010366.672563256871071514.6334.6330.820.82deltaEF1L C M
MA010466.672563256871071517.4187.4180.880.88n-MYCL C M
MA010466.672563256871071526.8196.8190.860.86n-MYCL C M
M00796*64.292572258371973028.6198.2550.850.84Pro onlyL C M
M0018767.502573258272072917.6708.1160.850.86USF L C M
M00770*59.522579259072673715.3245.6790.800.82Pro onlyL C M
M00912*59.522579259072673725.8466.3330.810.82Pro onlyL C M
M0025360.532580258772773424.9854.6960.900.89cap L C M
M0010054.052584259073173725.2154.7060.870.84CdxA L C M
M00486*56.412584259273173914.1265.7240.810.87Pro onlyL C M
M00498*55.262584259173173825.7974.3690.890.83Pro onlyL C M
MA003960.002598260774575425.2155.7050.810.82GklfL M
MA003960.002599260874675525.5647.1490.820.87GklfL M
MA010957.892605261275275914.6175.5110.810.84RUSH1-alfaL M
M0025363.162611261875876515.0505.1200.900.91cap L M
M00805*63.892611261675876315.7165.7160.830.83Pro onlyL M
M0025355.262621262876877525.7845.0780.930.90cap L M
M0025352.632624263177177823.7853.8020.850.85cap L M
M00935*57.5026372646796805111.1206.5790.960.82Pro onlyL M
M00975*56.412638264679780525.1806.3590.820.86Pro onlyL M
MA008058.332639264479880314.2647.7270.810.96SPI-1L M
M0007555.002669267882783617.2786.0420.930.87GATA-1 L M
M0007655.002669267882783617.2415.4780.920.85GATA-2 L M
M0025357.892669267682783424.1643.0830.870.82cap L M
MA009858.332670267582883327.2295.8960.970.91c-ETSL M
MA003555.562671267682983417.1057.1051.001.00GATA-1L M
MA003657.142671267582983315.9785.9780.960.96GATA-2L M
MA009552.782672267783083526.4008.3830.901.00Yin-YangL M
M00486*51.282675268383384127.1456.3440.940.90Pro onlyL M
M01022*50.002675268483384226.9856.9900.830.83Pro onlyL M
M00671*50.002676268383484117.0537.0530.850.85Pro onlyL M
M00805*50.002677268283584027.6266.0660.910.84Pro onlyL M
M0027255.002720272988789615.0608.0500.810.88p53 L M
M0027255.002720272988789626.1186.3030.840.84p53 L M
M00624*56.762721272788889415.1435.1430.840.84Pro onlyL M
MA003965.002732274189990825.7045.8270.820.83GklfL M
M00977*56.102744275491292217.3779.2610.800.86Pro onlyL only
MA009855.562744274991291717.6333.6580.990.81c-ETSL only
M0025554.552748276191692915.8837.1060.800.82GC box L only
MA005661.112749275491792214.9166.4690.810.88MZF_1-4L M
M0008357.892750275791892516.0399.7840.810.96MZF1 L M
M00695*59.462750275691892415.0706.1980.810.86Pro onlyL M
MA005658.332752275792092515.3228.2520.830.96MZF_1-4L M
M00695*54.052753275992192714.9624.9620.810.81Pro onlyL M
M00499*65.792760276792893524.1516.5910.820.93Pro onlyL M
M0025365.792770277793894524.6062.7900.880.81cap L M
M00733*62.222771278593995319.3388.3240.840.81Pro onlyL M
M00974*60.982773278394195119.5628.6690.900.87Pro onlyL M
M00974*63.412777278794595517.0427.8100.820.85Pro onlyL M
M00701*61.5427782786946954211.54211.5420.950.95Pro onlyL M
M00792*61.542778278694695417.8807.8800.950.95Pro onlyL M
M0025360.532780278794895514.3574.4270.870.88cap L M
M0025363.162784279195295912.6112.7950.800.81cap L M
M0007562.502788279795696515.8804.7210.870.82GATA-1 L M
M0007662.502788279795696515.4824.8490.850.83GATA-2 L M
MA003566.672790279595896315.4396.5040.910.97GATA-1L M
MA003668.572790279495896215.7785.5590.950.94GATA-2L M
M00486*51.282798280696697416.2856.2300.900.90Pro onlyL M
M00496*52.632798280596697326.8895.0510.930.85Pro onlyL M
M00498*52.632798280596697327.5265.7970.950.89Pro onlyL M
M00500*52.632798280596697328.4584.6480.960.83Pro onlyL M
M00497*52.63289329001052105924.1125.8340.820.90Pro onlyL C M
M00499*52.63289329001052105925.2434.6020.870.84Pro onlyL C M
M00500*52.63289329001052105924.0925.1520.810.85Pro onlyL C M
MA008050.00289328981052105714.2497.3320.810.94SPI-1L C M
M0014752.50289429031053106215.4776.0140.800.82HSF2 L C M
M0014752.50289429031053106225.4395.5940.800.81HSF2 L C M
MA010355.56289629011055106015.4875.4870.850.85deltaEF1L C M
M00498*63.16290429111063107025.5333.8040.880.81Pro onlyL C M
MA008066.67290429091063106818.1845.0290.980.85SPI-1L C M
M0007455.81290529171064107616.5617.7660.830.86c-Ets-1(p54) L C M
MA005760.00290529141064107316.3765.6980.820.80MZF_5-13L C M
M00658*63.16290729141066107316.6936.6930.830.83Pro onlyL C M
M00747*64.86290729131066107227.2507.2500.870.87Pro onlyL C M
MA008164.86290729131066107216.4936.4930.860.86SPI-BL C M
M00971*63.16290829151067107427.7107.7100.880.88Pro onlyL C M
M00986*66.67290829131067107215.3925.3920.880.88Pro onlyL C M
MA009866.67290829131067107223.6583.6580.810.81c-ETSL C M
M00492*60.532909291610681075210.4777.6700.990.88Pro onlyL C M
M00493*60.53290929161068107525.3885.2270.850.84Pro onlyL C M
M00494*60.53290929161068107524.4504.5070.800.80Pro onlyL C M
M00496*60.53290929161068107526.4926.0150.910.89Pro onlyL C M
M00497*60.53290929161068107527.8907.1980.990.96Pro onlyL C M
M00499*60.53290929161068107527.0076.4530.940.92Pro onlyL C M
M00500*60.53290929161068107528.4208.4200.960.96Pro onlyL C M
M00655*62.16290929151068107426.8266.8260.870.87Pro onlyL C M
MA008063.89290929141068107318.5798.5790.990.99SPI-1L C M
MA009863.89290929141068107325.7775.7770.910.91c-ETSL C M
M0039659.46291129171070107614.8475.1850.870.89En-1 L C M
M0025357.89292529321083109025.3313.7900.920.85cap L C M
M00983*58.542927293710851095111.3377.9470.920.83Pro onlyL C M
M0019958.97292929371087109526.9527.2560.820.83AP-1 L C M
MA009957.89292929361087109415.9896.8750.810.84c-FOSL C M
MA003758.33293029351088109314.0244.1590.820.82GATA-3L C M
M00724*63.41293629461094110425.7907.9230.810.86Pro onlyL C M
M00473*57.50293929481097110616.1147.2000.820.85Pro onlyL C M
M0027152.78297929841128113326.1016.0200.850.85AML-1a L C M
M00751*52.78297929841128113326.3466.5020.830.84Pro onlyL C M
MA006752.63299029971139114615.5036.3690.860.89Pax-2L C M
M0025350.00299129981140114722.6104.9980.800.90cap L C M
M00468*51.35299129971140114625.1685.1680.830.83Pro onlyL C M
M0025350.00299229991141114814.1963.6990.870.85cap L C
M0025352.63299630031145115222.7603.6210.810.84cap L C
M0025350.00305930661195120224.2824.4840.870.88cap L C
M00747*54.05306130671197120329.7015.6570.960.81Pro onlyL C M
MA003955.00306130701197120617.2596.0220.870.83GklfL C M
M00498*57.89306330701199120624.6684.6680.850.85Pro onlyL C M
M00499*57.89306330701199120624.1514.1510.820.82Pro onlyL C M
M00500*57.89306330701199120625.6035.6030.860.86Pro onlyL C M
M00801*58.33306330681199120425.0265.0260.830.83Pro onlyL C M
MA008058.33306330681199120414.8324.8320.840.84SPI-1L C M
M00747*59.46306630721202120829.6096.6820.950.84Pro onlyL C M
M00962*64.10306730751203121116.3285.1480.870.82Pro onlyL C M
M0025363.16306830751204121126.7766.3300.980.96cap L C M
MA008966.67307130761207121215.2644.4560.850.81TCF11-MafGL C M
M00801*63.89307230771208121325.0265.0260.830.83Pro onlyL C M

MAVID

MAVID ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aataaagataataatactaaataacaataataagtaacatttattgagtgtttcctctgtattaggcactctctatgtactttctaaggtacagagcaag
          ||  |                                                                                               
seq2      aagga-----------------------------------------------------------------------------------------------
                                                                                                              

                 110       120       130       140       150       160       170       180       190       200
seq1      gtatgtgagaatctgggctgggataagcaacaagcataatggaaagctggaagcactggtttttgtcacaaagacctgggtttgaaatctggttccacac
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 210       220       230       240       250       260       270       280       290       300
seq1      attttctttgtctctttgagaatcagtgagctaccagggtcctagtatgcctgcaatgtttaacataaagtgtgtagaatgattaagctaatgtcaggca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 310       320       330       340       350       360       370       380       390       400
seq1      catagcagctgcctgatgatagcagtcacgtgttcatgttgcttccctcgtgtcaccaccaccaataatatcaacatcggcataatattaatagcaaaca
                                                                                                |||||         
seq2      --------------------------------------------------------------------------------------attaa---------
                                                                                                   10         

                 410       420       430       440       450       460       470       480       490       500
seq1      ctggcacagtgcttaccacgtgccagaaaatggtttccgtttactaattcattgaatcctcaaaacaaacctacgtatgtactattttcatccccatctc
                                ||||||||                                                                      
seq2      ----------------------ccagaaaa----------------------------------------------------------------------
                                                                                                              

                 510       520       530       540       550       560       570       580       590       600
seq1      acagatgagaaaactgaggcacagagattataaattgtccaaggtcacgcagctgtaaccgtaataaaaggaaagacgacctttaactgagcgcttacta
                                 | |||||                                                                  ||||
seq2      ---------------------gtgggatta----------------------------------------------------------------agacta
                               20                                                                        30   

                 610       620       630       640       650       660       670       680       690       700
seq1      taatccacatctttaatgagctcgttacctacgttaactcttcacaataactccttaaagggtgtgcattatatctccactctacagatggggagactgt
          || ||       |||||||                                                                                 
seq2      tagtc-------ttaatga---------------------------------------------------------------------------------
                      40                                                                                      

                 710       720       730       740       750       760       770       780       790       800
seq1      ggctcagaattgcccatgggcgcaaagattccatcagggccgagcctgcactcactcagcctcccagatgcgacgaagcacgactccgctgtcagactcg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 810       820       830       840       850       860       870       880       890       900
seq1      aactccgcctcggggccccggggcgccgcctctctcccccggggcgccgcctctctcccccggggcgccgcctccctccgccgcggccgtcgagccgcgg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                 910       920       930       940       950       960       970       980       990      1000
seq1      agcgcctcttccgcggagccgccgcctgccaggattccagcgccgcagctgcggccgcagccattggtctctgacgtcagcggcgtgcggcgcactcggc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1010      1020      1030      1040      1050      1060      1070      1080      1090      1100
seq1      acgtcatcgccgcgcgccggcttgccaggagctggagggggaggtaggcggggcggcgcgtgacctaaggcctctctgccgcgcgcgcaggtacggggca
                                 |||||| | ||| ||                                                              
seq2      ----------------------agccaggtggtggtgg--------------------------------------------------------------
                                   50        60                                                               

                1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
seq1      gaagtcgcaggtacccagctgctgcccacatttctggtccagagtcccgaaccccgagcactgggatgcctggctactccggtgggtgggcggcgctcgg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1210      1220      1230      1240      1250      1260      1270      1280      1290      1300
seq1      agcgcggggataccgaggggcgggcccccagcttagagcgtgacccgaccccgcctaatccttaggcgttcgcccaccatttcccagtcccgtagagctg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1310      1320      1330      1340      1350      1360      1370      1380      1390      1400
seq1      gggccagacaccgcacagccctagtgctgttaccagtcgctgcctgcgccccgggggctgcgcccagcagcttcctggcccttttccagccattagcgtc
                     |||||                                                                                    
seq2      -----------cgcac------------------------------------------------------------------------------------
                                                                                                              

                1410      1420      1430      1440      1450      1460      1470      1480      1490      1500
seq1      cgttttccagccctgctgccccactgaggccccttcccacagcagtatcaccagccccagccccgcgttgttactattacttcccaggctaccagatcct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1510      1520      1530      1540      1550      1560      1570      1580      1590      1600
seq1      tttctgctcatgttccgacgtctcttcctactccagggccattattggtctcttctggacctttcagagataagagaggacctcggtagtgtagggccca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1610      1620      1630      1640      1650      1660      1670      1680      1690      1700
seq1      gtcctctgggaacaagggatggggagttttaggctgctgtccttggttccagtaacagagataccccctccacaggcacccaaatatgctccatagaata
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1710      1720      1730      1740      1750      1760      1770      1780      1790      1800
seq1      caatgagtgtggtcctgtggaggcccaatccaaaatatctagagctgagaagagatagagattttacaggccgtcaaatattcaatgggggtcgtctcta
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1810      1820      1830      1840      1850      1860      1870      1880      1890      1900
seq1      gagacttttaacaaactgtattgtgtacccacagattgcagaatggtgagcaaacatttgagaccatgttgctaaagcattaagcttggagaaagtgaca
             |||||||||                                                                                        
seq2      ---acttttaac----------------------------------------------------------------------------------------
               70                                                                                             

                1910      1920      1930      1940      1950      1960      1970      1980      1990      2000
seq1      gtaagaattagacaatagttttgaagtgaccaagaggttgtcacatggaagaattagaccttgttttgtgttttcctgcagagcgttatccagactAGCG
                                                                                                        | ||| 
seq2      ---------------------------------------------------------------------------------------------cccAGCA
                                                                                                          80  

                2010      2020      2030      2040      2050      2060      2070      2080      2090      2100
seq1      AGTGGGAGGCAGAtgtaaaatctggaacgcagattttagtttgttggaaggagaaatgtaacatagtgaaccacgcatctctggagggtgtaaagcagag
            |||||||||||                                               |||   |||          |||  || |||     ||| |
seq2      CTTGGGAGGCAGA----------------------------------------------gacagcctga---------gtctacagagtgagttccag-g
                90                                                     100                110       120       

                                                                                                              
seq1      ACAGCCAAg-------------------------------------------------------------------------------------------
          ||||||| |                                                                                           
seq2      ACAGCCAGggctatacagagaaaccctgtctcgaaaaaacaaacaaacaaataaacaaaacaaaacaaagactatagatgaaaatgacggaaggcttgtc
           130       140       150       160       170       180       190       200       210       220      

                                                                                                 2110         
seq1      ------------------------------------------------------------------------------------------gtaatttt--
                                                                                                    ||||||||  
seq2      aaggaaaaggattaaattatttttgtgtttcctcccagtgttatccacacagtgaaataagactgtcagaaaatttcagcctcgtggatagtaattttaa
           230       240       250       260       270       280       290       300       310       320      

                            2120         2130      2140        2150      2160      2170      2180      2190   
seq1      -------------------tggaaaagagt---gcaggagagtagagtaaacg--atgccagggttccttccgactctGAAATTCCGTGATACACTGAGC
                             |||| |    |   | ||||| | ||| | |  |  | |||| |  || || |         ||||| |||||||||||| 
seq2      tgcctgtaccacctgtttctggacagttctcttggaggagcgaagaatcagagtgaggccaagactcttttctggcagAGTATTCCATGATACACTGAGT
           330       340       350       360       370       380       390       400       410       420      

             2200      2210      2220      2230      2240      2250      2260      2270          2280      229
seq1      TGTCTttctcttgtggaagtttgaaagCCATTTGATAAAGTTCTCTtcattttttagaaatttgccctgctctggaattctgca----tgttcaggttac
          ||||||                     || | ||  ||||||||||                         || | | |||| |    ||  ||  ||  
seq2      TGTCTt--------------------cCCCTCTGTCAAAGTTCTCT-------------------------cttgcactctgaagggctgcgcacattct
           430                           440       450                                460       470       480 

          0      2300      2310      2320      2330      2340      2350      2360         2370      2380      
seq1      ttttggactgtcaagaTGACAGTTCCTTAATTTGGGtTCCATTattaccacagcaactggtttatttgtatagctgtcc---acacctagagcattttca
            || | ||    || || |||||||||||||| ||  |||||            ||||||           |  ||||   ||||| ||  | || |  
seq2      gattaggctcctgag-TGCCAGTTCCTTAATTTTGGgACCATT----------tgactggt-----------gtggtcccttacacccagtaccttctac
                490        500       510       520                 530                  540       550       56

          2390      2400      2410      2420      2430                   2440                                 
seq1      ccctgtcatttgattttatcttccgtgaagcttgtggtgtgtttcccttaa-------------ctgttcgagaaa------------------------
           |  ||| | ||                            |||||||||               ||| |  | |||                        
seq2      actcgtcgtctg----------------------------gtttcccttctgcaaagctattttctgctgaaaaaaaaaaaaaggcctttgaagtatctg
          0       570                                   580       590       600       610       620       630 

                           2450      2460      2470      2480      2490      2500      2510      2520      253
seq1      --------------------ctaaagcccttACTCTGAAGtctctgcaagcctccctctttgattttgaagcatgattgtcaccctcacagaaagctCTT
                              ||||| | |   ||||||||                                                      |||  |
seq2      ctacccgaactctttttattctaaaacacaaGCTCTGAAG------------------------------------------------------gctGCT
                640       650       660       670                                                             

          0      2540      2550         2560      2570      2580      2590      2600      2610      2620      
seq1      TTGAAatataccattcgtttaat---CCTGCTGGGTCACATGCTCTCTCACGAGTTGCTGAAATATctattCCTTGTGTTTATTTCAGAGCCaaGGCACT
          |||||    ||||   ||||| |   |||  |||||||||||     ||||  ||| |||||| |  |  | |||   |||   |||||||  ||  |||
seq2      TTGAA----accaagtgtttattgaaCCTTGTGGGTCACATGAGTGGTCACAGGTTTCTGAAAGAAttgatTCTTTGTTTTTCCTCAGAGCTgaGATACT
          680           690       700       710       720       730       740       750       760       770   

          2630                  2640      2650      2660      2670      2680      2690         2700      2710 
seq1      GATGTttg------------aaCTGGAAACTTcaaaacgtttaataagagtcttCAGGATGGGTTTGAACtagaca---agctagaaatttctttagaa-
          | ||| ||            | |||| |||||   | | ||| |  | | ||  | |||||| |||| |||  |||   ||  ||| ||    | |||| 
seq2      GGTGTgtgtgtgtgtgtgtgacCTGGGAACTTtggaccttttgaagaaactc-aCTGGATGGCTTTGGACtgtacacaaagtcagagatcctatcagaag
              780       790       800       810       820        830       840       850       860       870  

                     2720      2730      2740       2750      2760      2770      2780      2790      2800    
seq1      -----caccagctcTAGCATGCATctCCCACTTTTGgCTTTCC-TGGAGAGGAGCTTGAAGAGgtGGTTCTGCAGACAGCCACAGTGATACTTAGGAAAC
               |  |   || ||||||| |||||    | ||||  ||| ||| | |||| | ||| || |     || ||||||||| |  ||| ||   |||| 
seq2      ctgccctgcccatcCAGCATGCTTctCCTTGCTGTGgCACTCCcTGGGGGGGAGTTGGAACAGatTCCAGTGTAGACAGCCATACAGATGCTCCTGAAAG
               880       890       900       910       920       930       940       950       960       970  

                   2810      2820      2830      2840      2850      2860      2870      2880      2890      2
seq1      CAg-------aggaatggatttgacttttctgctaggattctctgttatagtttctccctgagttgtaagaggcatggaaatatacatgaaactgAAGAA
          |||       | |  ||  ||   ||  ||  |    | ||             ||||  || |||| ||  |    || |||    || ||   | |||
seq2      CAgctcacagatggttgagttaatctagtccacctccagtc-------------ctcctggacttgtcagcagtgcagagatacttctggaa---AGGAA
               980       990      1000      1010                   1020      1030      1040      1050         

          900      2910      2920      2930      2940      2950      2960      2970      2980      2990       
seq1      CCTGCAAGGAAGGGAAGTGGaactttcCATGCTGAGTGAAAACTAACCAAGtggcagttgtgactgaaaacactgaaacctACCACGtccagATTCACTG
          |||||   |||||||||| |  |||| |||  ||| | || | | | |||| ||||         |||| |||    |    ||||  |  |  ||||||
seq2      CCTGCCCCGAAGGGAAGTTG-ccttttCATATTGATTCAAGAGTGAACAAGaggca---------gaaaccacctggatggTCCACAcctggCATCACTG
          1060      1070       1080      1090      1100      1110               1120      1130      1140      

                      3000      3010      3020      3030      3040      3050      3060      3070      3080    
seq1      G-------------attgggggatagaggaacggtcacagctagggagaaagaagtgataccggaaaagaaaacctAAATGAAGAGAATGAGGatgactg
                         |||||||| |||| |  |    |  |||||                     ||||| ||| | |||||||| |||| |    |||
seq2      Agctggggacaccagttgggggacagagaactg----cttctagg---------------------aagaacacc-AGATGAAGAGGATGAAGccatctg
          1150      1160      1170          1180                           1190       1200      1210      1220

            3090  
seq1      cacagtag
           | |||| 
seq2      gagagtaa
                  

MAVID ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00322*52.5019972006798826.2396.3650.810.82Pro onlyM only
MA005655.5620022007848915.0045.8380.810.85MZF_1-4M only
M00695*54.0520032009859116.8736.8730.890.89Pro onlyM only
M00986*52.7820032008859016.0096.0090.910.91Pro onlyM only
M00497*52.6320042011869323.8693.8690.810.81Pro onlyM only
M0025350.0020062013889522.9262.9260.810.81cap M only
M00695*51.3520062012889415.7795.7790.840.84Pro onlyM only
M0025350.002101210812713413.4723.6240.840.84cap M only
M00935*62.502172218140541426.1536.6940.800.82Pro onlyM C L
M00493*63.162173218040641317.5016.2060.940.88Pro onlyM C L
M00494*63.162173218040641317.2726.1500.920.87Pro onlyM C L
M00496*63.162173218040641316.1905.6500.900.87Pro onlyM C L
M00497*63.162173218040641316.9255.9880.950.90Pro onlyM C L
M00499*63.162173218040641315.8346.5480.890.92Pro onlyM C L
M00500*63.162173218040641314.0154.7000.810.83Pro onlyM C L
M00750*62.162173217940641227.6336.2160.920.86Pro onlyM C L
M0010164.862174218040741315.0234.2000.900.87CdxA M C L
M00704*63.892174217940741225.1175.1170.820.82Pro onlyM C L
M0026067.502175218440841717.4356.8540.830.81HLF M C L
MA009863.892175218040841316.1424.6440.920.85c-ETSM C L
MA006765.792178218541141827.5176.9480.940.92Pax-2M C L
M0007565.002179218841242116.2765.5090.880.85GATA-1 M C L
M0007665.002179218841242115.4575.2200.850.84GATA-2 M C L
M00462*65.002179218841242115.0485.9880.830.86Pro onlyM C L
M00925*66.672180218841342116.0526.6130.820.83Pro onlyM C L
MA009965.792180218741342017.3486.2440.850.82c-FOSM C L
M00789*64.862181218741442015.5695.5690.840.84Pro onlyM C L
MA003566.672181218641441915.4395.4390.910.91GATA-1M C L
MA003665.712181218541441815.7785.7780.950.95GATA-2M C L
MA003766.672181218641441915.1255.1250.860.86GATA-3M C L
M0025368.422184219141742425.1245.1240.910.91cap M C L
M00468*70.272184219041742325.7985.7980.860.86Pro onlyM C L
MA003268.422184219141742425.5015.5010.890.89FREAC-3M C L
M00313*68.422186219341942625.9855.2750.880.85Pro onlyM C L
M00314*68.422186219341942626.1815.4650.890.85Pro onlyM C L
M00315*68.422186219341942625.9055.5960.880.87Pro onlyM C L
M00792*71.792190219842343127.8805.3900.950.84Pro onlyM C L
M0025350.002221222843444122.7212.7030.810.81cap M only
M00486*51.282227223544044815.8175.2520.880.85Pro onlyM C L
M00921*50.002230223744345015.7525.7520.830.83Pro onlyM C L
M00493*50.002231223844445115.4025.4020.850.85Pro onlyM C L
M00494*50.002231223844445114.4834.4830.800.80Pro onlyM C L
M00496*50.002231223844445114.6034.6030.830.83Pro onlyM C L
M00497*50.002231223844445115.0835.0830.860.86Pro onlyM C L
M00499*50.002231223844445116.4756.4750.920.92Pro onlyM C L
M00500*50.002231223844445114.6984.6980.830.83Pro onlyM C L
MA008052.782233223844645124.6444.6440.830.83SPI-1M C L
MA003752.782234223944745224.0874.0870.820.82GATA-3M C L
M00313*55.262306231349750414.4464.7580.810.82Pro onlyM C L
M00314*55.262306231349750414.5924.9060.810.83Pro onlyM C L
M00315*55.262306231349750414.3154.8790.800.83Pro onlyM C L
M00913*56.412306231449750528.0428.0420.950.95Pro onlyM C L
M0018360.002307231649850726.7347.7230.860.90c-Myb M C L
M0007458.142308232049951126.9426.7820.840.83c-Ets-1(p54) M C L
M0025360.532308231549950614.9794.9520.900.90cap M C L
M00492*60.532309231650050715.7515.7510.820.82Pro onlyM C L
M00493*60.532309231650050716.7986.7980.910.91Pro onlyM C L
M00494*60.532309231650050716.6006.6000.890.89Pro onlyM C L
M00496*60.532309231650050715.7565.7560.880.88Pro onlyM C L
M00497*60.532309231650050716.4426.4420.930.93Pro onlyM C L
M00498*60.532309231650050713.9993.9990.820.82Pro onlyM C L
M00499*60.532309231650050716.8106.8100.940.94Pro onlyM C L
M00500*60.532309231650050716.0616.0610.880.88Pro onlyM C L
M00960*60.002309231850050925.8455.8450.810.81Pro onlyM C L
M00975*61.542309231750050814.9394.9390.810.81Pro onlyM C L
M00621*57.142310232150151226.5646.5640.810.81Pro onlyM C L
M00655*62.162310231650150716.2986.2980.850.85Pro onlyM C L
M00971*63.162310231750150817.2117.2110.860.86Pro onlyM C L
M0014864.862311231750250824.2344.2340.800.80SRY M C L
M0022860.002311232050251117.2057.2050.810.81VBP M C L
M0026060.002311232050251117.4797.4790.830.83HLF M C L
M00436*57.142311232250251327.6987.6980.820.82Pro onlyM C L
M00658*63.162311231850250925.9655.9650.810.81Pro onlyM C L
M00770*57.142311232250251327.2627.2620.870.87Pro onlyM C L
M00912*57.142311232250251316.9866.9860.840.84Pro onlyM C L
MA008063.892311231650250727.3327.3320.940.94SPI-1M C L
MA009863.892311231650250715.9775.9770.920.92c-ETSM C L
MA008164.862312231850350927.3217.3210.890.89SPI-BM C L
M0010064.862314232050551124.5894.5890.830.83CdxA M C L
M0010164.862314232050551124.8624.8620.890.89CdxA M C L
M00313*63.162314232150551214.9014.9010.830.83Pro onlyM C L
M00314*63.162314232150551214.8734.8730.830.83Pro onlyM C L
M00315*63.162314232150551214.6854.6850.820.82Pro onlyM C L
M0039561.542314232250551314.5734.5730.850.85HOXA3 M C L
M00690*63.162314232150551215.7575.7570.850.85Pro onlyM C L
M0010064.862315232150651225.2115.2110.870.87CdxA M C L
M0010164.862315232150651213.1483.1480.820.82CdxA M C L
M0010164.862315232150651224.3434.3430.870.87CdxA M C L
M0024163.162315232250651318.4288.4280.890.89Nkx2-5 M C L
M00318*63.162315232250651327.5587.5580.830.83Pro onlyM C L
M0039561.542315232350651415.3045.3040.890.89HOXA3 M C L
M0014864.862316232250751324.4124.4120.810.81SRY M C L
M00747*64.862316232250751315.6575.6570.810.81Pro onlyM C L
MA006364.862316232250751317.7407.7400.940.94NkxM C L
M00486*58.972317232550851625.2814.4600.860.82Pro onlyM C L
MA007565.712317232150851229.1249.1241.001.00S8M C L
M00690*60.532318232550951628.5705.7570.950.85Pro onlyM C L
MA009552.782327233251852316.2257.0270.890.93Yin-YangM C L
M00671*50.002461246866367016.3567.0530.820.85Pro onlyM only
M00313*50.002462246966467124.5084.5080.810.81Pro onlyM only
M00314*50.002462246966467124.3474.3470.800.80Pro onlyM only
M00315*50.002462246966467124.3334.3330.800.80Pro onlyM only
M00805*50.002462246766466925.7165.7160.830.83Pro onlyM only
M00801*50.002464246966667124.8734.8730.820.82Pro onlyM only
MA008050.002464246966667115.3595.3590.860.86SPI-1M only
M00671*55.262527253467568217.52010.4850.860.98Pro onlyM C L
M00805*55.562528253367668125.9409.6620.841.00Pro onlyM C L
M0025355.262553256070070723.4672.6820.840.80cap M C
M0039556.412553256170070814.0744.4970.820.85HOXA3 M C
M00924*54.762553256470071126.9177.4120.820.84Pro onlyM C
M0017258.542556256670371327.4967.3040.840.83AP-1 M C
M0017458.542556256670371328.1307.3210.860.83AP-1 M C
M0018858.542556256670371327.2927.1240.820.81AP-1 M C
M00925*58.972557256570471228.7638.2680.900.89Pro onlyM C
M00926*60.532558256570571218.4738.4730.900.90Pro onlyM C L
M00964*61.902558256970571615.1665.1660.800.80Pro onlyM C L
M00986*61.112558256370571014.9184.9180.860.86Pro onlyM C L
MA009960.532558256570571228.1418.1410.880.88c-FOSM C L
M0012165.9125592572706719110.1228.0580.860.82USF M C L
M0012165.9125592572706719210.1228.0580.860.82USF M C L
M0012265.912559257270671919.4027.8920.900.86USF M C L
M0012265.912559257270671929.4027.8920.900.86USF M C L
M0022063.412560257070771718.88310.2830.820.86SREBP-1 M C L
M00684*62.502560256970771626.4067.9550.830.89Pro onlyM C L
M00796*64.2925602571707718210.3448.2100.890.84Pro onlyM C L
M00801*61.112560256570771215.8605.8600.860.86Pro onlyM C L
M01008*61.542560256870771528.2748.2740.890.89Pro onlyM C L
MA005862.502560256970771617.5428.3450.830.86MaxM C L
MA006763.162560256770771415.2445.2440.850.85Pax-2M C L
M0018765.002561257070871718.0908.7090.860.88USF M C L
M0022065.852561257170871828.5818.4390.820.81SREBP-1 M C L
MA008963.892561256670871325.3005.3000.850.85TCF11-MafGM C L
M0021765.792562256970971618.4737.9670.910.89USF M C L
M0021765.792562256970971626.1377.0840.820.86USF M C L
M0025365.792562256970971614.9474.0620.900.86cap M C L
M01029*65.792562256970971629.89111.8930.931.00Pro onlyM C L
MA009364.862562256870971527.8007.8000.870.87USFM C L
M00726*66.672563256871071514.7014.7010.820.82Pro onlyM C L
M00726*66.672563256871071526.9706.9700.940.94Pro onlyM C L
M01008*69.232563257171071818.3787.6730.890.87Pro onlyM C L
MA000466.672563256871071516.1126.1120.830.83ARNTM C L
MA000466.672563256871071526.1126.1120.830.83ARNTM C L
MA010366.672563256871071514.6334.6330.820.82deltaEF1M C L
MA010466.672563256871071517.4187.4180.880.88n-MYCM C L
MA010466.672563256871071526.8196.8190.860.86n-MYCM C L
M00796*64.292572258371973028.6198.2550.850.84Pro onlyM C L
M0018767.502573258272072917.6708.1160.850.86USF M C L
M00770*59.522579259072673715.3245.6790.800.82Pro onlyM C L
M00912*59.522579259072673725.8466.3330.810.82Pro onlyM C L
M0025360.532580258772773424.9854.6960.900.89cap M C L
M0010054.052584259073173725.2154.7060.870.84CdxA M C L
M00486*56.412584259273173914.1265.7240.810.87Pro onlyM C L
M00498*55.262584259173173825.7974.3690.890.83Pro onlyM C L
MA003960.002598260774575425.2155.7050.810.82GklfM L
MA003960.002599260874675525.5647.1490.820.87GklfM L
MA010957.892605261275275914.6175.5110.810.84RUSH1-alfaM L
M0025363.162611261875876515.0505.1200.900.91cap M L
M00805*63.892611261675876315.7165.7160.830.83Pro onlyM L
M0025355.262621262876877525.7845.0780.930.90cap M L
M0025352.632624263177177823.7853.8020.850.85cap M L
M00935*57.5026372646796805111.1206.5790.960.82Pro onlyM L
M00975*56.412638264679780525.1806.3590.820.86Pro onlyM L
MA008058.332639264479880314.2647.7270.810.96SPI-1M L
M0007555.002669267882783617.2786.0420.930.87GATA-1 M L
M0007655.002669267882783617.2415.4780.920.85GATA-2 M L
M0025357.892669267682783424.1643.0830.870.82cap M L
MA009858.332670267582883327.2295.8960.970.91c-ETSM L
MA003555.562671267682983417.1057.1051.001.00GATA-1M L
MA003657.142671267582983315.9785.9780.960.96GATA-2M L
MA009552.782672267783083526.4008.3830.901.00Yin-YangM L
M00486*51.282675268383384127.1456.3440.940.90Pro onlyM L
M01022*50.002675268483384226.9856.9900.830.83Pro onlyM L
M00671*50.002676268383484117.0537.0530.850.85Pro onlyM L
M00805*50.002677268283584027.6266.0660.910.84Pro onlyM L
M0027255.002720272988789615.0608.0500.810.88p53 M L
M0027255.002720272988789626.1186.3030.840.84p53 M L
M00624*56.762721272788889415.1435.1430.840.84Pro onlyM L
MA003965.002732274189990825.7045.8270.820.83GklfM L
M00704*55.562743274891091525.1175.1170.820.82Pro onlyM only
MA005661.112749275491792214.9166.4690.810.88MZF_1-4M L
M0008357.892750275791892516.0399.7840.810.96MZF1 M L
M00695*59.462750275691892415.0706.1980.810.86Pro onlyM L
MA005658.332752275792092515.3228.2520.830.96MZF_1-4M L
M00695*54.052753275992192714.9624.9620.810.81Pro onlyM L
M00499*65.792760276792893524.1516.5910.820.93Pro onlyM L
M0025365.792770277793894524.6062.7900.880.81cap M L
M00733*62.222771278593995319.3388.3240.840.81Pro onlyM L
M00974*60.982773278394195119.5628.6690.900.87Pro onlyM L
M00974*63.412777278794595517.0427.8100.820.85Pro onlyM L
M00701*61.5427782786946954211.54211.5420.950.95Pro onlyM L
M00792*61.542778278694695417.8807.8800.950.95Pro onlyM L
M0025360.532780278794895514.3574.4270.870.88cap M L
M0025363.162784279195295912.6112.7950.800.81cap M L
M0007562.502788279795696515.8804.7210.870.82GATA-1 M L
M0007662.502788279795696515.4824.8490.850.83GATA-2 M L
MA003566.672790279595896315.4396.5040.910.97GATA-1M L
MA003668.572790279495896215.7785.5590.950.94GATA-2M L
M00486*51.282798280696697416.2856.2300.900.90Pro onlyM L
M00496*52.632798280596697326.8895.0510.930.85Pro onlyM L
M00498*52.632798280596697327.5265.7970.950.89Pro onlyM L
M00500*52.632798280596697328.4584.6480.960.83Pro onlyM L
M00497*52.63289329001052105924.1125.8340.820.90Pro onlyM C L
M00499*52.63289329001052105925.2434.6020.870.84Pro onlyM C L
M00500*52.63289329001052105924.0925.1520.810.85Pro onlyM C L
MA008050.00289328981052105714.2497.3320.810.94SPI-1M C L
M0014752.50289429031053106215.4776.0140.800.82HSF2 M C L
M0014752.50289429031053106225.4395.5940.800.81HSF2 M C L
MA010355.56289629011055106015.4875.4870.850.85deltaEF1M C L
M00498*63.16290429111063107025.5333.8040.880.81Pro onlyM C L
MA008066.67290429091063106818.1845.0290.980.85SPI-1M C L
M0007455.81290529171064107616.5617.7660.830.86c-Ets-1(p54) M C L
MA005760.00290529141064107316.3765.6980.820.80MZF_5-13M C L
M00658*63.16290729141066107316.6936.6930.830.83Pro onlyM C L
M00747*64.86290729131066107227.2507.2500.870.87Pro onlyM C L
MA008164.86290729131066107216.4936.4930.860.86SPI-BM C L
M00971*63.16290829151067107427.7107.7100.880.88Pro onlyM C L
M00986*66.67290829131067107215.3925.3920.880.88Pro onlyM C L
MA009866.67290829131067107223.6583.6580.810.81c-ETSM C L
M00492*60.532909291610681075210.4777.6700.990.88Pro onlyM C L
M00493*60.53290929161068107525.3885.2270.850.84Pro onlyM C L
M00494*60.53290929161068107524.4504.5070.800.80Pro onlyM C L
M00496*60.53290929161068107526.4926.0150.910.89Pro onlyM C L
M00497*60.53290929161068107527.8907.1980.990.96Pro onlyM C L
M00499*60.53290929161068107527.0076.4530.940.92Pro onlyM C L
M00500*60.53290929161068107528.4208.4200.960.96Pro onlyM C L
M00655*62.16290929151068107426.8266.8260.870.87Pro onlyM C L
MA008063.89290929141068107318.5798.5790.990.99SPI-1M C L
MA009863.89290929141068107325.7775.7770.910.91c-ETSM C L
M0039659.46291129171070107614.8475.1850.870.89En-1 M C L
M0025357.89292529321083109025.3313.7900.920.85cap M C L
M00983*58.542927293710851095111.3377.9470.920.83Pro onlyM C L
M0019958.97292929371087109526.9527.2560.820.83AP-1 M C L
MA009957.89292929361087109415.9896.8750.810.84c-FOSM C L
MA003758.33293029351088109314.0244.1590.820.82GATA-3M C L
M00724*63.41293629461094110425.7907.9230.810.86Pro onlyM C L
M00473*57.50293929481097110616.1147.2000.820.85Pro onlyM C L
M0027152.78297929841128113326.1016.0200.850.85AML-1a M C L
M00751*52.78297929841128113326.3466.5020.830.84Pro onlyM C L
MA006752.63299029971139114615.5036.3690.860.89Pax-2M C L
M0025350.00299129981140114722.6104.9980.800.90cap M C L
M00468*51.35299129971140114625.1685.1680.830.83Pro onlyM C L
M00747*54.05306130671197120329.7015.6570.960.81Pro onlyM C L
MA003955.00306130701197120617.2596.0220.870.83GklfM C L
M00498*57.89306330701199120624.6684.6680.850.85Pro onlyM C L
M00499*57.89306330701199120624.1514.1510.820.82Pro onlyM C L
M00500*57.89306330701199120625.6035.6030.860.86Pro onlyM C L
M00801*58.33306330681199120425.0265.0260.830.83Pro onlyM C L
MA008058.33306330681199120414.8324.8320.840.84SPI-1M C L
M00747*59.46306630721202120829.6096.6820.950.84Pro onlyM C L
M00962*64.10306730751203121116.3285.1480.870.82Pro onlyM C L
M0025363.16306830751204121126.7766.3300.980.96cap M C L
MA008966.67307130761207121215.2644.4560.850.81TCF11-MafGM C L
M00801*63.89307230771208121325.0265.0260.830.83Pro onlyM C L

BLASTZ

BLASTZ ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aataaagataataatactaaataacaataataagtaacatttattgagtgtttcctctgtattaggcactctctatgtactttctaaggtacagagcaag
          ||  ||   |  |  |       |  |  |  |    | |            |  |             | |      |     |  |   |||||  ||
seq2      aaggaattaaccagaaaagtgggattaagactatagtcttaatgaagccaggtggtggtggcgcacacttttaaccccagcacttgggaggcagagacag
                  10        20        30        40        50        60        70        80        90       100

                 110       120       130       140       150       160       170       180       190       200
seq1      gtatgtgagaatctgggctgggataagcaacaagcataatggaaagctggaagcactggtttttgtcacaaagacctgggtttgaaatctggttccacac
                   |    | |          || | ||    ||  | ||         || |        |  ||            ||          ||  
seq2      cctgagtctacagagtgagttccaggacagccagggctatacagagaaaccctgtctcgaaaaaacaaacaaacaaataaacaaaacaaaacaaagacta
                 110       120       130       140       150       160       170       180       190       200

                 210       220       230       240       250       260       270       280       290       300
seq1      attttctttgtctctttgagaatcagtgagctaccagggtcctagtatgcctgcaatgtttaacataaagtgtgtagaatgattaagctaatgtcaggca
              |     |  |     |  |      |  |         |  | |   ||     |   |     |            | ||||    |   |    
seq2      tagatgaaaatgacggaaggcttgtcaaggaaaaggattaaattatttttgtgtttcctcccagtgttatccacacagtgaaataagactgtcagaaaat
                 210       220       230       240       250       260       270       280       290       300

                 310       320       330       340       350       360       370       380       390       400
seq1      catagcagctgcctgatgatagcagtcacgtgttcatgttgcttccctcgtgtcaccaccaccaataatatcaacatcggcataatattaatagcaaaca
             |||  |      |  |         | ||| |    || |||      ||   |       |    |  | ||  |  |    |  | |        
seq2      ttcagcctcgtggatagtaattttaatgcctgtaccacctgtttctggacagttctcttggaggagcgaagaatcagagtgaggccaagactcttttctg
                 310       320       330       340       350       360       370       380       390       400

                 410       420       430       440       450       460       470       480       490       500
seq1      ctggcacagtgcttaccacgtgccagaaaatggtttccgtttactaattcattgaatcctcaaaacaaacctacgtatgtactattttcatccccatctc
             |   | | | |   ||           |      |  | |    |   |      |||  ||        |  ||      |   |  |    |  |
seq2      gcagagtattccatgatacactgagttgtcttcccctctgtcaaagttctctcttgcactctgaagggctgcgcacattctgattaggctcctgagtgcc
                 410       420       430       440       450       460       470       480       490       500

                 510       520       530       540       550       560       570       580       590       600
seq1      acagatgagaaaactgaggcacagagattataaattgtccaaggtcacgcagctgtaaccgtaataaaaggaaagacgacctttaactgagcgcttacta
          |        |     |   ||      |  |    |  |  |   |  | | ||   ||  |  |     |     |   ||  ||        |     
seq2      agttccttaattttgggaccatttgactggtgtggtcccttacacccagtaccttctacactcgtcgtctggtttcccttctgcaaagctattttctgct
                 510       520       530       540       550       560       570       580       590       600

                 610       620       630       640       650       660       670       680       690       700
seq1      taatccacatctttaatgagctcgttacctacgttaactcttcacaataactccttaaagggtgtgcattatatctccactctacagatggggagactgt
           ||   | |                || || |         ||    ||       | |     |        |          ||  ||   |      
seq2      gaaaaaaaaaaaaaggcctttgaagtatctgctacccgaactctttttattctaaaacacaagctctgaaggctgctttgaaaccaagtgtttattgaac
                 610       620       630       640       650       660       670       680       690       700

                 710       720       730       740       750       760       770       780       790       800
seq1      ggctcagaattgcccatgggcgcaaagattccatcagggccgagcctgcactcactcagcctcccagatgcgacgaagcacgactccgctgtcagactcg
                |        |  ||    | | |||    ||    ||  ||    |    |      |          |              ||| |     |
seq2      cttgtgggtcacatgagtggtcacaggtttctgaaagaattgattctttgtttttcctcagagctgagatactggtgtgtgtgtgtgtgtgtgacctggg
                 710       720       730       740       750       760       770       780       790       800

                 810       820       830       840       850       860       870       880       890       900
seq1      aactccgcctcggggccccggggcgccgcctctctcccccggggcgccgcctctctcccccggggcgccgcctccctccgccgcggccgtcgagccgcgg
          ||||  |   |               |                |  |      ||                    | | |||    | |           
seq2      aactttggaccttttgaagaaactcactggatggctttggactgtacacaaagtcagagatcctatcagaagctgccctgcccatccagcatgcttctcc
                 810       820       830       840       850       860       870       880       890       900

                 910       920       930       940       950       960       970       980       990      1000
seq1      agcgcctcttccgcggagccgccgcctgccaggattccagcgccgcagctgcggccgcagccattggtctctgacgtcagcggcgtgcggcgcactcggc
                |    | |   |  |  |  |   |  |       |      | ||           |         |  |||  |  |   |    | ||   
seq2      ttgctgtggcactccctgggggggagttggaacagattccagtgtagacagccatacagatgctcctgaaagcagctcacagatggttgagttaatctag
                 910       920       930       940       950       960       970       980       990      1000

                1010      1020      1030      1040      1050      1060      1070      1080      1090      1100
seq1      acgtcatcgccgcgcgccggcttgccaggagctggagggggaggtaggcggggcggcgcgtgacctaaggcctctctgccgcgcgcgcaggtacggggca
           |  | ||    |   | ||  |     |   || || |  |  |  |    |   |  |   |  | ||    |                |   | |  
seq2      tccacctccagtcctcctggacttgtcagcagtgcagagatacttctggaaaggaacctgccccgaagggaagttgccttttcatattgattcaagagtg
                1010      1020      1030      1040      1050      1060      1070      1080      1090      1100

                1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
seq1      gaagtcgcaggtacccagctgctgcccacatttctggtccagagtcccgaaccccgagcactgggatgcctggctactccggtgggtgggcggcgctcgg
           |          |  |  |         |    |  | |   | |           | || | ||  | | |   ||| |     |   |     |    
seq2      aacaagaggcagaaaccacctggatggtccacacctggcatcactgagctggggacaccagttgggggacagagaactgcttctaggaagaacaccagat
                1110      1120      1130      1140      1150      1160      1170      1180      1190      1200

                1210      1220      1230      1240      1250      1260      1270      1280      1290      1300
seq1      agcgcggggataccgaggggcgggcccccagcttagagcgtgacccgaccccgcctaatccttaggcgttcgcccaccatttcccagtcccgtagagctg
             | ||    | | |   |  |                                                                             
seq2      gaagaggatgaagccatctggagagtaa------------------------------------------------------------------------
                1210      1220                                                                                

                1310      1320      1330      1340      1350      1360      1370      1380      1390      1400
seq1      gggccagacaccgcacagccctagtgctgttaccagtcgctgcctgcgccccgggggctgcgcccagcagcttcctggcccttttccagccattagcgtc
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1410      1420      1430      1440      1450      1460      1470      1480      1490      1500
seq1      cgttttccagccctgctgccccactgaggccccttcccacagcagtatcaccagccccagccccgcgttgttactattacttcccaggctaccagatcct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1510      1520      1530      1540      1550      1560      1570      1580      1590      1600
seq1      tttctgctcatgttccgacgtctcttcctactccagggccattattggtctcttctggacctttcagagataagagaggacctcggtagtgtagggccca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1610      1620      1630      1640      1650      1660      1670      1680      1690      1700
seq1      gtcctctgggaacaagggatggggagttttaggctgctgtccttggttccagtaacagagataccccctccacaggcacccaaatatgctccatagaata
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1710      1720      1730      1740      1750      1760      1770      1780      1790      1800
seq1      caatgagtgtggtcctgtggaggcccaatccaaaatatctagagctgagaagagatagagattttacaggccgtcaaatattcaatgggggtcgtctcta
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1810      1820      1830      1840      1850      1860      1870      1880      1890      1900
seq1      gagacttttaacaaactgtattgtgtacccacagattgcagaatggtgagcaaacatttgagaccatgttgctaaagcattaagcttggagaaagtgaca
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                1910      1920      1930      1940      1950      1960      1970      1980      1990      2000
seq1      gtaagaattagacaatagttttgaagtgaccaagaggttgtcacatggaagaattagaccttgttttgtgttttcctgcagagcgttatccagactagcg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2010      2020      2030      2040      2050      2060      2070      2080      2090      2100
seq1      agtgggaggcagatgtaaaatctggaacgcagattttagtttgttggaaggagaaatgtaacatagtgaaccacgcatctctggagggtgtaaagcagag
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2110      2120      2130      2140      2150      2160      2170      2180      2190      2200
seq1      acagccaaggtaatttttggaaaagagtgcaggagagtagagtaaacgatgccagggttccttccgactctgaaattccgtgatacactgagctgtcttt
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2210      2220      2230      2240      2250      2260      2270      2280      2290      2300
seq1      ctcttgtggaagtttgaaagccatttgataaagttctcttcattttttagaaatttgccctgctctggaattctgcatgttcaggttacttttggactgt
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2310      2320      2330      2340      2350      2360      2370      2380      2390      2400
seq1      caagatgacagttccttaatttgggttccattattaccacagcaactggtttatttgtatagctgtccacacctagagcattttcaccctgtcatttgat
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2410      2420      2430      2440      2450      2460      2470      2480      2490      2500
seq1      tttatcttccgtgaagcttgtggtgtgtttcccttaactgttcgagaaactaaagcccttactctgaagtctctgcaagcctccctctttgattttgaag
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2510      2520      2530      2540      2550      2560      2570      2580      2590      2600
seq1      catgattgtcaccctcacagaaagctcttttgaaatataccattcgtttaatcctgctgggtcacatgctctctcacgagttgctgaaatatctattcct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2610      2620      2630      2640      2650      2660      2670      2680      2690      2700
seq1      tgtgtttatttcagagccaaggcactgatgtttgaactggaaacttcaaaacgtttaataagagtcttcaggatgggtttgaactagacaagctagaaat
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2710      2720      2730      2740      2750      2760      2770      2780      2790      2800
seq1      ttctttagaacaccagctctagcatgcatctcccacttttggctttcctggagaggagcttgaagaggtggttctgcagacagccacagtgatacttagg
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2810      2820      2830      2840      2850      2860      2870      2880      2890      2900
seq1      aaaccagaggaatggatttgacttttctgctaggattctctgttatagtttctccctgagttgtaagaggcatggaaatatacatgaaactgaagaacct
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                2910      2920      2930      2940      2950      2960      2970      2980      2990      3000
seq1      gcaaggaagggaagtggaactttccatgctgagtgaaaactaaccaagtggcagttgtgactgaaaacactgaaacctaccacgtccagattcactggat
                                                                                                              
seq2      ----------------------------------------------------------------------------------------------------
                                                                                                              

                3010      3020      3030      3040      3050      3060      3070      3080      3090  
seq1      tgggggatagaggaacggtcacagctagggagaaagaagtgataccggaaaagaaaacctaaatgaagagaatgaggatgactgcacagtag
                                                                                                      
seq2      --------------------------------------------------------------------------------------------
                                                                                                      

BLASTZ ALIGNED HITS

No hits found

Run time: 92.9 sec