CONREAL

CONREAL ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      ttttagtagatacaaggtttcaccatgttggtcagcctggtctcgaactcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacgg
              | | | |                                                                                         
seq2      ccacattcgtttttt-------------------------------------------------------------------------------------
                  10                                                                                          

                 110       120       130       140       150       160       170       180       190       200
seq1      gcgtgagccaccgcacccggctaatcacggcatttttataagcctTGTGATTTCtgtgattctaatgtttagattctaatgcttagccagggttgagaac
                                                       |||| | | |||| ||||  | |           |   ||   |  | |     |
seq2      ---------------------------------------------TGTGGTCTGtgtgtttctgctttgagacaaggtctctctacatattgctagctgc
                                                          20        30        40        50        60        70

                 210       220       230       240       250       260       270       280       290       300
seq1      caccgatttaatccaatcccttctcctagttttACTAAAGAGAAAACTAtaacctagaatggtgagcaacttgcccaaagtcacccaacatgttagtgca
                                            | ||||      || ||  | || ||||     ||    |  | |  | ||               
seq2      ---------------------------------CCCAAAGTTTGTTCTGtagaccaggatggcctcaaatacacagacatcctcctgcttctgcctcagg
                                                   80        90       100       110       120       130       

                                                                                                              
seq1      aggtgcac--------------------------------------------------------------------------------------------
                |                                                                                             
seq2      cctgctagaatcaaagttgtgggacacatggtatgtctgcacacttgtaatgcaccccttagctccggttacttgtagcgctggtggattcctggccacc
          140       150       160       170       180       190       200       210       220       230       

                                                          310       320       330       340       350       36
seq1      -------------------------------------------------CGAGAGAGATTGTaccagtAGCAAGAATATgctCATGATGTTTATAATTGT
                                                            ||||||||  | | ||  ||||| ||  |    ||| ||||||||||| |
seq2      atgaaaagcacaaggagcctaggggacagagagagagagagagagagagAGAGAGAGAGAGAaacaacAGCAATAAATT---GATGGTGTTTATAATTTT
          240       250       260       270       280       290       300       310          320       330    

          0       370       380       390       400       410       420       430        440       450       4
seq1      TCTCGCTGGAGTTAATCCCGGAAGCATTTCTTTTtagttcacagaggcCTTATATAAATTACTTTTTACTTTGGCAC-AGCACTTACGCTTCTGCtaaca
          ||| | |||| ||| ||| ||||||||| ||  |||||      ||    | ||||| |||| ||| |||||||||  ||||||||||||||||| |  |
seq2      TCTAGTTGGAATTAGTCCTGGAAGCATTCCTCCTtagtcggagaagc-ACTGTATAATTTACCTTTCACTTTGGCAGtAGCACTTACGCTTCTGCcacga
             340       350       360       370       380        390       400       410       420       430   

          60       470        480       490       500       510            520       530       540       550  
seq1      CTGAAATGGGTTCGCAT-TCCTGACCACAAAAGGACAGAGATGAAAttCTACATTCACa-----CAGCCCGCCAAGTTAGCCAAGCTCCCTAGGAGGCTG
          || ||||||||||||||  |||||||||||||||||||||||  |  |   |||||||      | |||||| |  ||||| ||||||||||| ||||||
seq2      CTAAAATGGGTTCGCATtCCCTGACCACAAAAGGACAGAGATAGATctGCGCATTCACcactcaCTGCCCGCAACATTAGCAAAGCTCCCTAGAAGGCTG
              440       450       460       470       480       490       500       510       520       530   

               560       570       580       590       600        610       620        630       640       650
seq1      TCTGAAGTGCCTAAAATGCTTCTCTACAATGATCACCCAGAGCTGAGAGACTTCAg-TGGGGTAGTGAGAAGAAA-GAGGGTTGGGAGAGACAGGAAAGC
            ||| |||||||||||||| ||||||| |||||||||||||||||||||     | ||| |  ||||||||| | ||||| ||||| | |   ||||||
seq2      CTTGAGGTGCCTAAAATGCTGCTCTACAGTGATCACCCAGAGCTGAGAGAACCTCggTGGAGAGGTGAGAAGACAaGAGGGCTGGGAAATAAGAGAAAGC
              540       550       560       570       580       590       600       610       620       630   

                 660       670       680       690       700       710       720       730       740       750
seq1      ATCCTCTcctTGAGGGAAGGAACTGGGAATCAACTGAGAACCAgctAGCACTGCCAGGAGGTGAGGAGAGGGAAGGAGAATAATTTAAATGAGGCCAGGG
          || |||| || | | || | | ||||||||| |||||||| | ||  ||| ||||||||||| ||| ||||||||||||| ||||| ||||||  ||| |
seq2      ATTCTCTtctAGGGAGAGGAAGCTGGGAATCCACTGAGAATCGgccGGCATTGCCAGGAGGTAAGGTGAGGGAAGGAGAAGAATTTCAATGAGTTCAGAG
              640       650       660       670       680       690       700       710       720       730   

                 760       770          780       790       800         810       820       830       840     
seq1      AGCTTCTGCTccctcAATTAAAcggtgat---AGACGGCCTgacaCCACCAGCc--CTCGAAGCCtgagatccacaggaaatgttAAAAACTGGCTtgGC
          |||||||||| ||  | | | |      |    ||| || | |   |||||  |  ||| || || || | ||| || |  |    ||||||| ||   |
seq2      AGCTTCTGCTaccctAGTAACAgaagtgtagtGGACAGCATcaggACACCAATcctCTCAAAACCcgacagccagagcatgt---GAAAACTGACTctTC
              740       750       760       770       780       790       800       810          820       830

            850       860       870       880       890                        900       910        920       
seq1      AATATAagtattagaaaatacttcttccaacactcaccaaaaactaagct-----------------CCCAATAAAgaacac-TTCACCTgccctccgca
          |  || | ||   |  || | |  | |  || |     |   |      |                  ||||  ||  |  | | ||| |  |  |   |
seq2      AGCATGactaaatgcgaaaagtgttcctgactccagaaactgagcctcattagcgaacagctcacccACCAAGCAAccaacccTCCACTTcgctccttta
                 840       850       860       870       880       890       900       910       920       930

          930       940       950       960       970       980       990      1000      1010      1020      1
seq1      accctctacctctcttccccgccaagatcttcacccaaggtctcaagagggcggttcccaacctcacgtgacaCAGCGGTCACGTGACATGGCcccgggg
           | |   |   |    | ||                  |          | |   |   |             | ||| |||||||||     || || |
seq2      gctcctcaataccaaccaccagatgccaaaagcagagggaggctcttgcgtcacgtgata-------------CTGCGATCACGTGACGCCTTccgggtg
                 940       950       960       970       980       990                   1000      1010      1

          030      1040      1050         1060      1070      1080      1090         
seq1      agccgaggtgagcgttCCAGCTTCcggag---CCGGAGGGGGCCCGGCGTACCCAGCCCccagcccgacgtgacc
          |||| |||        |||| | | | ||     ||  |||| ||| ||| ||||  |||   |         | 
seq2      agccaaggcatagt--CCAGTTCCtgcagcctTAGGGAGGGGTCCGCCGTGCCCACACCcagccagactcgacc-
          020      1030        1040      1050      1060      1070      1080          

CONREAL ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00751*52.78146151162116.34610.0470.831.00Pro onlyC only
M0027152.78146151162115.94310.2690.851.00AML-1a C only
M00722*52.63146153162317.91110.5470.870.96Pro onlyC only
M0021151.28146154162419.25510.6770.890.93Poly A downstream element C only
M0039651.35147153172314.8423.7250.870.81En-1 C only
M00486*51.28234242717915.8985.7870.880.88Pro onlyC only
M00690*50.00234241717814.6036.4730.800.87Pro onlyC only
M0010151.35243249808615.2473.3830.910.83CdxA C only
MA003755.5630931428729214.5305.2860.840.87GATA-3C L M
M0025360.5331031728829522.8762.8760.810.81cap C L M
MA003758.3331131628929415.2865.2860.870.87GATA-3C L M
M0025357.8931432129229923.8962.8760.860.81cap C L M
MA003761.1131532029329817.4225.2860.960.87GATA-3C L M
M00624*59.4632833430631214.9727.3310.830.93Pro onlyC L M
M00499*57.8933133830931626.6784.0690.930.82Pro onlyC L M
M0010156.7633133730931523.7465.4050.850.92CdxA C L M
M0025371.0534234931732423.4134.1640.830.87cap C L
M0029373.91343358318333210.46511.5410.840.87Freac-7 C L M
M00472*73.1734335331832829.51610.1560.900.91Pro onlyC L M
M00476*72.7334335631833119.5409.5400.800.80Pro onlyC L M
M0026872.73343356318331212.86310.3030.930.86XFD-2 C L M
M00792*71.7934335131832624.5355.1370.800.83Pro onlyC L M
MA004073.17344354319329112.2289.7130.920.85HFH-1C L M
M0029472.0934435631933119.8419.5130.860.85HFH-8 C L M
M0028972.09344356319331110.87710.5700.890.88HFH-3 C L M
MA004271.43344355319330110.61710.2170.890.88HFH-3C L M
M00473*75.0034535432032929.22410.1970.900.93Pro onlyC L M
M00791*74.4234535732033227.0376.7350.820.81Pro onlyC L M
M00489*73.8134535632033125.7855.7850.810.81Pro onlyC L M
M0014872.9734535132032626.7827.3440.910.93SRY C L M
M0041574.3634635432132915.7145.2820.830.81AREB6 C L M
M00486*74.3634635432132925.6987.2040.870.94Pro onlyC L M
MA003173.6834635332132829.4127.8640.900.84FREAC-4C L M
M00471*73.6834735432232929.1269.1260.900.90Pro onlyC L M
M00498*73.6834735432232913.9653.9650.820.82Pro onlyC L M
MA003373.6834735432232914.3074.3070.800.80FREAC-7C L M
MA003373.6834735432232924.8134.8130.820.82FREAC-7C L M
M00724*73.1734735732233219.4219.4210.890.89Pro onlyC L M
M0010172.9734735332232824.4194.4190.880.88CdxA C L M
M00402*72.5034735632233128.5728.5720.910.91Pro onlyC L M
M0010175.6834835432332915.1885.1880.910.91CdxA C L M
M0010075.6834835432332915.6865.6860.890.89CdxA C L M
MA008474.3634835632333116.2356.2350.820.82SRYC L M
M0009676.9234935732433226.2126.2120.820.82Pbx-1 C L M
M0013776.7434936132433615.6675.5100.810.80Oct-1 C L M
M00489*76.1934936032433517.0637.0630.850.85Pro onlyC L M
M00980*75.6834935532433018.3108.3100.930.93Pro onlyC L M
M00451*76.1935036132533627.5427.5420.800.80Pro onlyC L M
M00471*76.3235135832633316.6068.3930.820.88Pro onlyC L M
M0010175.6835135732633214.3464.3460.870.87CdxA C L M
M0010175.6835135732633227.2887.2880.990.99CdxA C L M
M0010075.6835135732633225.8255.8250.900.90CdxA C L M
M0039574.3635135932633414.3873.9680.840.82HOXA3 C L M
MA006375.6835235832733318.9967.4190.990.92NkxC L M
M0039675.6835235832733316.1395.0860.940.88En-1 C L M
M0009674.3635236032733528.0455.7230.880.80Pbx-1 C L M
M00640*73.6835235932733425.3176.0130.810.84Pro onlyC L M
MA007574.2935335732833229.1249.1241.001.00S8C L M
M00962*76.9235436232933726.8544.7320.890.81Pro onlyC L M
M00921*78.9535536233033719.2115.2110.960.81Pro onlyC L M
M00499*78.9535636333133815.9107.2050.900.95Pro onlyC L M
M00493*78.9535636333133814.4856.4940.810.90Pro onlyC L M
M00630*84.6236337133834615.6886.8080.820.87Pro onlyC L M
M00494*81.5836637334134824.5288.6320.800.98Pro onlyC L M
MA006776.3237338034835514.1324.9790.810.84Pax-2C L M
M0022379.4937438234935719.1827.8460.880.84STATx C L M
MA002877.5037438334935819.5076.5040.930.83Elk-1C L M
M0007472.0937438634936117.8096.2280.860.82c-Ets-1(p54) C L M
M00777*69.77375387350362210.4848.9670.910.87Pro onlyC L M
M0003272.50376385351360110.3988.0570.940.87c-Ets-1(p54) C L M
M00743*73.68377384352359111.0908.6990.990.90Pro onlyC L M
M00971*73.6837738435235928.6397.2600.910.87Pro onlyC L M
MA008075.0037838335335818.7116.4831.000.91SPI-1C L M
MA009875.0037838335335827.7976.3001.000.93c-ETSC L M
M00500*71.0537838535336024.5245.6610.830.87Pro onlyC L M
M00498*71.0537838535336023.8044.6680.810.85Pro onlyC L M
M00499*71.0537838535336024.4544.8760.840.85Pro onlyC L M
M00494*71.0537838535336024.4394.9950.800.82Pro onlyC L M
M00497*71.0537838535336027.3956.4580.970.93Pro onlyC L M
M0027270.0038139035636515.2575.2570.810.81p53 C L M
M0027270.0038139035636526.3675.9300.840.83p53 C L M
M00624*67.5738238835736316.3267.5020.890.93Pro onlyC L M
M0025368.4238339035836514.9965.6760.900.93cap C L M
M00704*66.6738438935936427.9558.4310.971.00Pro onlyC L M
MA010965.7938439135936615.5906.2190.850.87RUSH1-alfaC L M
MA003965.0038439335936828.1526.1800.900.84GklfC L M
MA003365.7940841538238915.3435.1350.850.84FREAC-7C L M
MA003368.4241041738439127.8154.4470.960.81FREAC-7C L M
M0010167.5741041638439025.1013.5160.900.84CdxA C L M
M01010*64.4441042438439816.1976.1780.800.80Pro onlyC L M
M01010*64.4441042438439827.6076.4610.840.81Pro onlyC L M
M00980*70.2741141738539129.2836.7620.970.86Pro onlyC L M
M00471*73.68412419386393111.8838.3930.990.88Pro onlyC L M
MA003373.6841241938639325.5425.1880.860.84FREAC-7C L M
M0010172.9741241838639227.4447.2881.000.99CdxA C L M
M0010072.9741241838639227.3935.8250.970.90CdxA C L M
M00489*69.0541342438739828.0916.9340.890.85Pro onlyC L M
M00930*68.2941442438839816.9409.8060.800.88Pro onlyC L M
M00750*72.9741542138939526.4428.4800.870.95Pro onlyC L M
M0039672.9741542138939526.1253.6740.940.81En-1 C L M
M00496*71.0541542238939614.4096.8850.820.93Pro onlyC L M
M00494*71.0541542238939614.7354.7000.810.81Pro onlyC L M
MA003265.7941942639340025.7234.5710.900.84FREAC-3C L M
MA003962.5042143039540426.4708.7670.850.91GklfC L M
M00972*58.5442243239640627.46812.0030.810.92Pro onlyC L M
M00967*58.9742343139740525.6055.6050.810.81Pro onlyC L M
M00747*62.1642443039840416.83410.8770.851.00Pro onlyC L M
M0014862.1642543139940526.9984.8480.920.83SRY C L M
M00486*58.9742643440040825.6675.5070.870.87Pro onlyC L M
M00805*58.3342843340240726.0666.0660.840.84Pro onlyC L M
M00426*55.2642943640341017.5566.9760.870.85Pro onlyC M
M00736*55.2642943640341018.1546.6720.880.84Pro onlyC M
M00427*55.2642943640341017.2616.6330.860.84Pro onlyC M
M00431*55.2642943640341016.1535.3240.840.82Pro onlyC M
M00428*55.2642943640341015.0794.2180.850.82Pro onlyC M
M00341*69.0543744841242329.2129.2120.820.82Pro onlyC L M
M00624*67.5743744341241816.3266.3260.890.89Pro onlyC L M
M0025368.4243844541342014.0864.0860.860.86cap C L M
M00484*67.5043844741342227.0207.0200.840.84Pro onlyC L M
M0039566.6743844641342125.7355.7350.910.91HOXA3 C L M
M00699*69.0543945041442529.0989.0980.800.80Pro onlyC L M
M0024067.5743944541442028.2028.2020.910.91Nkx2-5 C L M
MA006367.5743944541442026.5556.5550.890.89NkxC L M
M0010867.5043944841442328.0588.0580.820.82NRF-2 C L M
MA006267.5043944841442328.0588.0580.820.82NRF-2C L M
M0039466.6743944741442225.8595.8590.840.84Msx-1 C L M
M00492*65.7943944641442116.8976.8970.860.86Pro onlyC L M
M00498*65.7943944641442113.9653.9650.820.82Pro onlyC L M
M00496*65.7943944641442115.3515.3510.860.86Pro onlyC L M
M00497*65.7943944641442114.5574.5570.840.84Pro onlyC L M
M00332*68.2944045041542517.7647.7640.840.84Pro onlyC L M
M00655*64.8644044641542115.6545.6540.820.82Pro onlyC L M
M00658*68.4244144841642325.9475.9470.810.81Pro onlyC L M
MA008066.6744144641642124.9184.9180.840.84SPI-1C L M
MA008170.2744244841742325.7855.7850.840.84SPI-BC L M
MA003273.6844345041842524.7644.7640.850.85FREAC-3C L M
M00500*76.3244545242042714.0924.0920.810.81Pro onlyC L M
M00498*76.3244545242042714.6684.6680.850.85Pro onlyC L M
M00499*76.3244545242042715.9945.9940.900.90Pro onlyC L M
M00496*76.3244545242042714.1224.1220.810.81Pro onlyC L M
M00497*76.3244545242042715.9795.9790.900.90Pro onlyC L M
M0025376.3244645342142824.3984.3980.880.88cap C L M
MA008077.7844745242242725.6285.6280.870.87SPI-1C L M
MA009877.7844745242242713.8223.8220.820.82c-ETSC L M
M0010083.7845946543444025.2154.2460.870.82CdxA C L M
M0025378.9546046743544223.5553.7780.840.85cap C L M
M00640*78.9546146843644316.8267.6470.870.91Pro onlyC L M
M0039678.3846146743644215.1854.1460.890.83En-1 C L M
M00314*76.3246246943744425.3695.3690.850.85Pro onlyC L M
M00313*76.3246246943744425.2215.2210.850.85Pro onlyC L M
M00315*76.3246246943744425.4965.4960.860.86Pro onlyC L M
M00630*74.3646247043744515.9755.9750.830.83Pro onlyC L M
MA009577.7846346843844325.2365.2360.840.84Yin-YangC L M
M00333*72.0946347543845016.9766.9760.810.81Pro onlyC L M
M00986*72.2246547044044513.6123.6120.800.80Pro onlyC L M
MA008069.4446847344344824.0454.0450.800.80SPI-1C L M
M0015969.7747648845246426.9926.9920.860.86C/EBP C only
MA008975.0047748245345815.6735.6730.860.86TCF11-MafGC only
M00963*74.3647748545346115.3105.3100.810.81Pro onlyC only
M00984*68.89477491453467113.19213.1920.910.91Pro onlyC only
M00769*68.89477491453467210.50810.5080.860.86Pro onlyC only
M00801*75.0047848345445925.8605.8600.860.86Pro onlyC only
M00646*73.6847848545446126.9586.9580.860.86Pro onlyC only
M0021171.7947848645446227.1407.1400.820.82Poly A downstream element C only
M01007*67.35478496454472214.04614.0460.860.86Pro onlyC only
M0021566.67478492454468210.59710.5970.830.83SRF C only
M00962*71.7947948745546316.3466.3460.870.87Pro onlyC L M
M00722*71.05479486455462210.27210.2720.950.95Pro onlyC L M
MA000271.79480488456464212.29512.2950.990.99AML-1C L M
M0016069.0548049145646717.0477.0470.810.81SRY C L M
M0018665.91480493456469111.19711.1970.850.85SRF C L M
M00751*75.00481486457462210.04710.0471.001.00Pro onlyC L M
M0027175.00481486457462210.26910.2691.001.00AML-1a C L M
M00731*73.68481488457464111.54911.5491.001.00Pro onlyC L M
M0021672.5048149045746617.9767.9760.830.83TATA C L M
M00810*70.83481498457474112.39212.3920.850.85Pro onlyC L M
M0021568.8948149545747119.8529.8520.810.81SRF C L M
M0028567.4448149345746925.5395.5390.810.81TCF11 C L M
M00922*68.89482496458472111.97211.9720.860.86Pro onlyC L M
M0025268.8948249645847216.1556.1550.810.81TATA C L M
M0010070.2748348945946524.9474.9470.850.85CdxA C L M
MA007869.2348349145946725.9555.9550.820.82SOX17C L M
M0041569.2348349145946725.1405.1400.800.80AREB6 C L M
M0039569.2348349145946724.8274.8270.860.86HOXA3 C L M
M00511*68.1848349645947218.6698.6690.820.82Pro onlyC L M
M00486*69.2348449246046814.1174.1170.810.81Pro onlyC L M
M01004*70.7348649646247216.3086.3080.800.80Pro onlyC L M
M00747*70.2748649246246825.5065.5060.800.80Pro onlyC L M
M00960*70.0048649546247119.8739.8730.940.94Pro onlyC L M
MA003970.0048649546247117.1447.1440.870.87GklfC L M
M0041973.8148749846347414.9814.9810.810.81MEIS1 C L M
M00967*71.7948749546347115.8005.8000.820.82Pro onlyC L M
M0014870.2748749346346914.4134.4130.810.81SRY C L M
M00963*74.3648849646447229.7269.7260.960.96Pro onlyC L M
M00921*76.3248949646547229.4229.4220.970.97Pro onlyC L M
M0025376.3248949646547223.2183.2180.830.83cap C L M
MA009875.0048949446547023.6743.6740.810.81c-ETSC L M
M00701*79.4949049846647427.3467.3460.820.82Pro onlyC L M
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M0012254.55100410179941007211.75710.2450.960.92USF C L M
M00917*53.6610041014994100417.8317.9270.830.84Pro onlyC L M
M0012354.7610051016995100618.8298.5690.850.85c-Myc/Max C L M
M0012354.7610051016995100628.1466.8410.830.80c-Myc/Max C L M
M0005554.7610051016995100618.5809.1910.850.87N-Myc C L M
M0005554.7610051016995100629.7938.4350.890.85N-Myc C L M
M00796*54.76100510169951006111.76611.2320.930.91Pro onlyC L M
M00796*54.7610051016995100629.6199.0920.870.86Pro onlyC L M
M0022053.66100510159951005114.15016.0870.951.00SREBP-1 C L M
MA005852.50100510149951004111.41312.4090.950.98MaxC L M
M00976*51.2810051013995100328.0537.3320.890.86Pro onlyC L M
M01008*51.28100510139951003211.85510.5800.990.96Pro onlyC L M
MA006750.0010051012995100217.8326.4160.950.90Pax-2C L M
M0022056.10100610169961006213.19113.9160.930.95SREBP-1 C L M
M00322*55.0010061015996100517.8986.3260.860.81Pro onlyC L M
M00322*55.0010061015996100527.8987.6370.860.85Pro onlyC L M
M0018755.00100610159961005111.7959.7200.980.91USF C L M
M0018755.00100610159961005211.79510.7700.980.95USF C L M
MA005855.00100710169971006210.9309.6210.930.89MaxC L M
M00981*53.8510071015997100526.1296.1290.800.80Pro onlyC L M
M0004152.6310071014997100416.5276.5270.810.81CRE-BP1/c-Jun C L M
M0004152.6310071014997100426.5276.5270.810.81CRE-BP1/c-Jun C L M
M01029*52.63100710149971004110.35110.3510.950.95Pro onlyC L M
M01029*52.63100710149971004210.35110.3510.950.95Pro onlyC L M
M0021752.6310071014997100419.6459.6450.960.96USF C L M
M0021752.6310071014997100429.6459.6450.960.96USF C L M
MA009351.35100710139971003210.92310.9230.980.98USFC L M
M0024051.3510071013997100316.7856.7850.850.85Nkx2-5 C L M
M00799*51.3510071013997100327.7907.7900.890.89Pro onlyC L M
M00976*53.8510081016998100617.5958.4000.870.90Pro onlyC L M
M01008*53.85100810169981006110.40410.8530.950.97Pro onlyC L M
MA009351.35100810149981004110.92310.9230.980.98USFC L M
M0024051.3510081014998100426.7856.7850.850.85Nkx2-5 C L M
M00799*51.3510081014998100417.7907.7900.890.89Pro onlyC L M
MA000450.00100810139981003110.35110.3511.001.00ARNTC L M
MA000450.00100810139981003210.35110.3511.001.00ARNTC L M
MA010450.00100810139981003110.53310.5331.001.00n-MYCC L M
MA010450.00100810139981003210.53310.5331.001.00n-MYCC L M
MA000650.0010081013998100314.8914.8910.800.80Ahr-ARNTC L M
MA000650.0010081013998100324.8914.8910.800.80Ahr-ARNTC L M
M00726*50.0010081013998100318.1338.1331.001.00Pro onlyC L M
M00726*50.0010081013998100328.1338.1331.001.00Pro onlyC L M
MA010350.0010081013998100316.1566.1560.880.88deltaEF1C L M
MA010350.0010081013998100326.1566.1560.880.88deltaEF1C L M
MA006752.6310091016999100628.5338.2250.980.97Pax-2C L M
MA008950.00101010151000100516.0406.0400.880.88TCF11-MafGC L M
M00801*50.00101110161001100626.5589.0440.890.99Pro onlyC L M
M0025350.00104410511032103914.7304.9520.890.90cap C L M
M00491*53.491057106910481060111.92711.5480.880.88Pro onlyC only
MA009852.78105810631049105423.8393.6580.820.81c-ETSC L
M00986*58.33106210671053105815.5303.9820.890.82Pro onlyC L
M00986*61.11106310681054105913.8344.9180.810.86Pro onlyC L
M00803*55.56106710721058106325.9215.6580.860.85Pro onlyC L M
M0037850.00107210831063107416.9937.2910.850.86Pax-4 C only
MA005655.56107410791065107024.8464.8460.810.81MZF_1-4C L M
M00986*55.56107410791065107025.4304.3460.890.84Pro onlyC L M

LAGAN

LAGAN ALIGNMENT

                                                10        20                                     30        40 
seq1      ------------------------------ttttagtagatacaaggtttcacca-----------------------------tgttggtcagcctggt
                                        | |   | || ||||||| || | |                             ||| |  |||  ||| 
seq2      ccacattcgtttttttgtggtctgtgtgtttctgctttgagacaaggtctctctacatattgctagctgccccaaagtttgttctgtagaccaggatggc
                  10        20        30        40        50        60        70        80        90       100

                 50        60        70        80        90       100       110       120       130       140 
seq1      ctcgaactcctgacctCGTGATCCGCccgcctcggcctcccaaagtgctgggattacgggcgtgagccaccgcacccggctaatcacggcatttttataa
          ||| ||      ||   |  |||| || || || |||||      |||| | || |  |  ||| | |||       | ||   |||    || | ||  
seq2      ctcaaat-----acacAGACATCCTCctgcttctgcctca-ggcctgctagaatcaaagttgtgggacacatggtatgtctgcacac----ttgtaatgc
                      110       120       130        140       150       160       170       180           190

                150       160       170       180       190       200       210       220       230       240 
seq1      gccttgtgatttctgtgattctaatgtttagattctaatgcttagccagggttgagaaccaccgatttaatccaatcccttctcctagttttactaaaga
           ||   |   | | || | |   |    | |      || | | ||||   |  | | |                                     |  |
seq2      accccttagctccggttacttgtagcgctgg---tggattcctggccaccatgaaaagc-------------------------------------acaa
                 200       210       220          230       240                                            250

                250       260       270       280       290       300       310       320       330       340 
seq1      gaaaactataacctagaatggtgagcaacttgcccaaagtcacccaacatgttagtgcaaggtgcacCGAGAGAGATTGTaccagtAGCAAGAATATgct
          | |  |||      |||  |                                 || |  ||    |  ||||||||  | | ||  ||||| ||  |   
seq2      ggagcctaggggacagagagag-------------------------------agagagagagagagAGAGAGAGAGAGAaacaacAGCAATAAATT---
                 260       270                                      280       290       300       310         

                350       360       370       380       390       400       410       420       430        440
seq1      CATGATGTTTATAATTGTTCTCGCTGGAGTTAATCCCGGAAGCATTTCTTTTtagttcacagaggcCTTATATAAATTACTTTTTACTTTGGCa-cAGCA
           ||| ||||||||||| |||| | |||| ||| ||| ||||||||| ||  ||||| |  ||| ||  | ||||| |||| ||| |||||||||  ||||
seq2      GATGGTGTTTATAATTTTTCTAGTTGGAATTAGTCCTGGAAGCATTCCTCCTtagt-cggagaagcACTGTATAATTTACCTTTCACTTTGGCagtAGCA
           320       330       340       350       360       370        380       390       400       410     

                 450       460       470        480       490       500       510            520       530    
seq1      CTTACGCTTCTGCtaacaCTGAAATGGGTTCGCATTCC-TGACCACAAAAGGACAGAGATGAAAttCTACATTCAC-----aCAGCCCGCCAAGTTAGCC
          ||||||||||||| |  ||| ||||||||||||||||| |||||||||||||||||||||  |  |   |||||||     || |||||| |  ||||| 
seq2      CTTACGCTTCTGCcacgaCTAAAATGGGTTCGCATTCCcTGACCACAAAAGGACAGAGATAGATctGCGCATTCACcactcaCTGCCCGCAACATTAGCA
            420       430       440       450       460       470       480       490       500       510     

             540       550       560       570       580       590       600        610       620        630  
seq1      AAGCTCCCTAGGAGGCTGTCTGAAGTGCCTAAAATGCTTCTCTACAATGATCACCCAGAGCTGAGAGA-cttcAGTGGGGTAGTGAGAAGA-aaGAGGGT
          ||||||||||| ||||||  ||| |||||||||||||| ||||||| ||||||||||||||||||||| | || |||| |  ||||||||| ||||||| 
seq2      AAGCTCCCTAGAAGGCTGCTTGAGGTGCCTAAAATGCTGCTCTACAGTGATCACCCAGAGCTGAGAGAacctcGGTGGAGAGGTGAGAAGAcaaGAGGGC
            520       530       540       550       560       570       580       590       600       610     

               640       650       660       670       680       690       700       710       720       730  
seq1      TGGGAGAGACAGGAAAGCATCCTCTcctTGAGGGAAGGAACTGGGAATCAACTGAGAACCAgctAGCACTGCCAGGAGGTGAGGAGAGGGAAGGAGAATA
          ||||| | |   |||||||| |||| || | | || | | ||||||||| |||||||| | ||  ||| ||||||||||| ||| ||||||||||||| |
seq2      TGGGAAATAAGAGAAAGCATTCTCTtctAGGGAGAGGAAGCTGGGAATCCACTGAGAATCGgccGGCATTGCCAGGAGGTAAGGTGAGGGAAGGAGAAGA
            620       630       640       650       660       670       680       690       700       710     

               740       750       760       770          780       790       800         810       820       
seq1      ATTTAAATGAGGCCAGGGAGCTTCTGCTccctcaatta---aacggtgatAGACGGCCTgacaCCACCAGCCCTc--gaagcctgagatccacaggaaat
          |||| ||||||  ||| ||||||||||| ||  | | |   ||  ||  | ||| || | |   |||||  ||||   || || || | ||| || |  |
seq2      ATTTCAATGAGTTCAGAGAGCTTCTGCTaccctagtaacagaagtgtagtGGACAGCATcaggACACCAATCCTctcaaaacccgacagccagagcatgt
            720       730       740       750       760       770       780       790       800       810     

          830       840       850       860       870       880       890       900       910       920       
seq1      gttaAAAACTGGCTtgGCAATATAagtattagaaaatacttcttccaacactcaccaaaaactaagctcccaaTAAAGAACACtTCACCTGCcctccg--
          |   ||||||| ||   ||  || | ||   |  || | |  | |  || |    || ||||| ||| | || ||  |||||  |||||  ||   |   
seq2      g---AAAACTGACTctTCAGCATGactaaatgcgaaaagtgttcctgactc----cagaaactgagc-ctcatTAGCGAACAGcTCACCCACcaagcaac
               820       830       840       850       860           870        880       890       900       

            930       940            950       960       970           980       990      1000      1010      
seq1      caaccctctacctctcttc-----cccgccaagatcttcacccaaggtctcaa----gagggcggttcccAACCTCACGTGACACAGCGGTCACGTGACA
          |||||||| || || || |     | |  ||| | |  |  |||    |  ||    ||||| || ||    | |||||||| || ||| ||||||||| 
seq2      caaccctccacttcgctcctttagctcctcaataccaaccaccagatgccaaaagcagagggaggctct-TGCGTCACGTGATACTGCGATCACGTGACG
          910       920       930       940       950       960       970        980       990      1000      

          1020      1030      1040      1050         1060      1070      1080      1090         
seq1      TGGCccCGGGGAgccgaggtgagcgttCCAGCTTCcggagc---CGGAGGGGGCCCGGCgTACCCAgcccccagcccgacgtgacc
              || || ||||| |||       ||||| | | | |||    ||  |||| ||| ||| |||| | ||||||| |||  ||||
seq2      CCTTccGGGTGAgccaaggca--tagtCCAGTTCCtgcagccttAGGGAGGGGTCCGCCgTGCCCA-cacccagccagactcgacc
          1010      1020        1030      1040      1050      1060      1070       1080         

LAGAN ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M0007550.00586711212124.6235.5710.810.85GATA-1 L M
M0007650.00586711212125.8936.6990.870.90GATA-2 L M
MA003552.78606511411923.7205.9660.820.94GATA-1L M
MA003651.43616511511925.0475.9780.910.96GATA-2L M
MA009850.00616611512015.7387.2290.910.97c-ETSL M
MA003755.5630931428729214.5305.2860.840.87GATA-3L C M
M0025360.5331031728829522.8762.8760.810.81cap L C M
MA003758.3331131628929415.2865.2860.870.87GATA-3L C M
M0025357.8931432129229923.8962.8760.860.81cap L C M
MA003761.1131532029329817.4225.2860.960.87GATA-3L C M
M00624*59.4632833430631214.9727.3310.830.93Pro onlyL C M
M0010156.7633133730931523.7465.4050.850.92CdxA L C M
M00499*57.8933133830931626.6784.0690.930.82Pro onlyL C M
M0025371.0534234931732423.4134.1640.830.87cap L C
M0026872.73343356318331212.86310.3030.930.86XFD-2 L C M
M0029373.91343358318333210.46511.5410.840.87Freac-7 L C M
M00472*73.1734335331832829.51610.1560.900.91Pro onlyL C M
M00476*72.7334335631833119.5409.5400.800.80Pro onlyL C M
M00792*71.7934335131832624.5355.1370.800.83Pro onlyL C M
M0028972.09344356319331110.87710.5700.890.88HFH-3 L C M
M0029472.0934435631933119.8419.5130.860.85HFH-8 L C M
MA004073.17344354319329112.2289.7130.920.85HFH-1L C M
MA004271.43344355319330110.61710.2170.890.88HFH-3L C M
M0014872.9734535132032626.7827.3440.910.93SRY L C M
M00473*75.0034535432032929.22410.1970.900.93Pro onlyL C M
M00489*73.8134535632033125.7855.7850.810.81Pro onlyL C M
M00791*74.4234535732033227.0376.7350.820.81Pro onlyL C M
M0041574.3634635432132915.7145.2820.830.81AREB6 L C M
M00486*74.3634635432132925.6987.2040.870.94Pro onlyL C M
MA003173.6834635332132829.4127.8640.900.84FREAC-4L C M
M0010172.9734735332232824.4194.4190.880.88CdxA L C M
M00402*72.5034735632233128.5728.5720.910.91Pro onlyL C M
M00471*73.6834735432232929.1269.1260.900.90Pro onlyL C M
M00498*73.6834735432232913.9653.9650.820.82Pro onlyL C M
M00724*73.1734735732233219.4219.4210.890.89Pro onlyL C M
MA003373.6834735432232914.3074.3070.800.80FREAC-7L C M
MA003373.6834735432232924.8134.8130.820.82FREAC-7L C M
M0010075.6834835432332915.6865.6860.890.89CdxA L C M
M0010175.6834835432332915.1885.1880.910.91CdxA L C M
MA008474.3634835632333116.2356.2350.820.82SRYL C M
M0009676.9234935732433226.2126.2120.820.82Pbx-1 L C M
M0013776.7434936132433615.6675.5100.810.80Oct-1 L C M
M00489*76.1934936032433517.0637.0630.850.85Pro onlyL C M
M00980*75.6834935532433018.3108.3100.930.93Pro onlyL C M
M00451*76.1935036132533627.5427.5420.800.80Pro onlyL C M
M0010075.6835135732633225.8255.8250.900.90CdxA L C M
M0010175.6835135732633214.3464.3460.870.87CdxA L C M
M0010175.6835135732633227.2887.2880.990.99CdxA L C M
M0039574.3635135932633414.3873.9680.840.82HOXA3 L C M
M00471*76.3235135832633316.6068.3930.820.88Pro onlyL C M
M0009674.3635236032733528.0455.7230.880.80Pbx-1 L C M
M0039675.6835235832733316.1395.0860.940.88En-1 L C M
M00640*73.6835235932733425.3176.0130.810.84Pro onlyL C M
MA006375.6835235832733318.9967.4190.990.92NkxL C M
MA007574.2935335732833229.1249.1241.001.00S8L C M
M00962*76.9235436232933726.8544.7320.890.81Pro onlyL C M
M00921*78.9535536233033719.2115.2110.960.81Pro onlyL C M
M00493*78.9535636333133814.4856.4940.810.90Pro onlyL C M
M00499*78.9535636333133815.9107.2050.900.95Pro onlyL C M
M00630*84.6236337133834615.6886.8080.820.87Pro onlyL C M
M00494*81.5836637334134824.5288.6320.800.98Pro onlyL C M
MA006776.3237338034835514.1324.9790.810.84Pax-2L C M
M0007472.0937438634936117.8096.2280.860.82c-Ets-1(p54) L C M
M0022379.4937438234935719.1827.8460.880.84STATx L C M
MA002877.5037438334935819.5076.5040.930.83Elk-1L C M
M00777*69.77375387350362210.4848.9670.910.87Pro onlyL C M
M0003272.50376385351360110.3988.0570.940.87c-Ets-1(p54) L C M
M00743*73.68377384352359111.0908.6990.990.90Pro onlyL C M
M00971*73.6837738435235928.6397.2600.910.87Pro onlyL C M
M00494*71.0537838535336024.4394.9950.800.82Pro onlyL C M
M00497*71.0537838535336027.3956.4580.970.93Pro onlyL C M
M00498*71.0537838535336023.8044.6680.810.85Pro onlyL C M
M00499*71.0537838535336024.4544.8760.840.85Pro onlyL C M
M00500*71.0537838535336024.5245.6610.830.87Pro onlyL C M
MA008075.0037838335335818.7116.4831.000.91SPI-1L C M
MA009875.0037838335335827.7976.3001.000.93c-ETSL C M
M0027270.0038139035636515.2575.2570.810.81p53 L C M
M0027270.0038139035636526.3675.9300.840.83p53 L C M
M00624*67.5738238835736316.3267.5020.890.93Pro onlyL C M
M0025368.4238339035836514.9965.6760.900.93cap L C M
M00704*66.6738438935936427.9558.4310.971.00Pro onlyL C M
MA003965.0038439335936828.1526.1800.900.84GklfL C M
MA010965.7938439135936615.5906.2190.850.87RUSH1-alfaL C M
MA003365.7940841538238915.3435.1350.850.84FREAC-7L C M
M0010167.5741041638439025.1013.5160.900.84CdxA L C M
M01010*64.4441042438439816.1976.1780.800.80Pro onlyL C M
M01010*64.4441042438439827.6076.4610.840.81Pro onlyL C M
MA003368.4241041738439127.8154.4470.960.81FREAC-7L C M
M00980*70.2741141738539129.2836.7620.970.86Pro onlyL C M
M0010072.9741241838639227.3935.8250.970.90CdxA L C M
M0010172.9741241838639227.4447.2881.000.99CdxA L C M
M00471*73.68412419386393111.8838.3930.990.88Pro onlyL C M
MA003373.6841241938639325.5425.1880.860.84FREAC-7L C M
M00489*69.0541342438739828.0916.9340.890.85Pro onlyL C M
M00930*68.2941442438839816.9409.8060.800.88Pro onlyL C M
M0039672.9741542138939526.1253.6740.940.81En-1 L C M
M00494*71.0541542238939614.7354.7000.810.81Pro onlyL C M
M00496*71.0541542238939614.4096.8850.820.93Pro onlyL C M
M00750*72.9741542138939526.4428.4800.870.95Pro onlyL C M
MA003265.7941942639340025.7234.5710.900.84FREAC-3L C M
MA003962.5042143039540426.4708.7670.850.91GklfL C M
M00972*58.5442243239640627.46812.0030.810.92Pro onlyL C M
M00967*58.9742343139740525.6055.6050.810.81Pro onlyL C M
M00747*62.1642443039840416.83410.8770.851.00Pro onlyL C M
M0014862.1642543139940526.9984.8480.920.83SRY L C M
M00486*58.9742643440040825.6675.5070.870.87Pro onlyL C M
M00805*58.3342843340240726.0666.0660.840.84Pro onlyL C M
M00341*69.0543744841242329.2129.2120.820.82Pro onlyL C M
M00624*67.5743744341241816.3266.3260.890.89Pro onlyL C M
M0025368.4243844541342014.0864.0860.860.86cap L C M
M0039566.6743844641342125.7355.7350.910.91HOXA3 L C M
M00484*67.5043844741342227.0207.0200.840.84Pro onlyL C M
M0010867.5043944841442328.0588.0580.820.82NRF-2 L C M
M0024067.5743944541442028.2028.2020.910.91Nkx2-5 L C M
M0039466.6743944741442225.8595.8590.840.84Msx-1 L C M
M00492*65.7943944641442116.8976.8970.860.86Pro onlyL C M
M00496*65.7943944641442115.3515.3510.860.86Pro onlyL C M
M00497*65.7943944641442114.5574.5570.840.84Pro onlyL C M
M00498*65.7943944641442113.9653.9650.820.82Pro onlyL C M
M00699*69.0543945041442529.0989.0980.800.80Pro onlyL C M
MA006267.5043944841442328.0588.0580.820.82NRF-2L C M
MA006367.5743944541442026.5556.5550.890.89NkxL C M
M00332*68.2944045041542517.7647.7640.840.84Pro onlyL C M
M00655*64.8644044641542115.6545.6540.820.82Pro onlyL C M
M00658*68.4244144841642325.9475.9470.810.81Pro onlyL C M
MA008066.6744144641642124.9184.9180.840.84SPI-1L C M
MA008170.2744244841742325.7855.7850.840.84SPI-BL C M
MA003273.6844345041842524.7644.7640.850.85FREAC-3L C M
M00496*76.3244545242042714.1224.1220.810.81Pro onlyL C M
M00497*76.3244545242042715.9795.9790.900.90Pro onlyL C M
M00498*76.3244545242042714.6684.6680.850.85Pro onlyL C M
M00499*76.3244545242042715.9945.9940.900.90Pro onlyL C M
M00500*76.3244545242042714.0924.0920.810.81Pro onlyL C M
M0025376.3244645342142824.3984.3980.880.88cap L C M
MA008077.7844745242242725.6285.6280.870.87SPI-1L C M
MA009877.7844745242242713.8223.8220.820.82c-ETSL C M
M0010083.7845946543444025.2154.2460.870.82CdxA L C M
M0025378.9546046743544223.5553.7780.840.85cap L C M
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M00630*87.1856757554855626.3825.1910.850.80Pro onlyL C M
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M00450*84.6258359156457229.7119.7110.940.94Pro onlyL C M
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MA005686.1158559056657125.0045.0040.810.81MZF_1-4L C M
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M00986*83.3358659156757225.8075.8070.900.90Pro onlyL C M
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MA010383.3358659156757214.6614.6610.820.82deltaEF1L C M
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M0017675.0059059957158028.6458.6450.870.87AP-4 L C M
M00927*76.9259059857157915.7945.7940.810.81Pro onlyL C M
M0025376.3259159857257926.0096.0090.940.94cap L C M
M00632*73.8159160257258317.0247.0240.800.80Pro onlyL C M
M0014171.7959460257558316.8216.8210.830.83Lyf-1 L C M
MA003772.2259660157758214.9904.9900.860.86GATA-3L C M
M0008350.0060761458959616.7716.3400.840.82MZF1 L M
M00690*50.0060761458959625.2755.5040.830.84Pro onlyL M
MA005652.7860961459159614.9894.9160.810.81MZF_1-4L C M
M0025355.2661261959460125.7925.5130.930.92cap L C M
M0034860.0061562459760617.9316.9650.840.81GATA-2 L C M
MA003763.8961762259960413.7913.7910.810.81GATA-3L C M
MA008061.1161862360060515.4965.4960.870.87SPI-1L C M
M00933*57.5062763661061927.9069.6830.820.87Pro onlyL C M
M0000857.5062863761162016.3938.6640.810.89Sp1 L C M
M0025355.2662863561161823.2695.2560.830.91cap L C M
M00720*56.4162863661161917.81010.2790.850.94Pro onlyL C M
MA007957.5062863761162016.5328.2740.810.88SP1L C M
M0037859.5262964061262326.5147.7960.840.88Pax-4 L C M
M0008761.9063064161362417.0648.6010.840.88Ik-2 L C M
M0014161.54631639614622110.5928.3540.950.88Lyf-1 L C M
MA005663.8963263761562015.8385.2620.850.83MZF_1-4L C M
M00986*63.8963363861662116.0095.6330.910.90Pro onlyL C M
MA010971.0563664361962624.6115.6600.810.85RUSH1-alfaL C M
MA003975.0064064962363215.1779.1390.810.93GklfL C M
M00486*71.7964365162663415.6155.7950.870.88Pro onlyL C M
M00493*71.0564365062663325.8304.5950.870.81Pro onlyL C M
M00496*71.0564365062663326.8896.2130.930.90Pro onlyL C M
M00497*71.0564365062663325.3484.6810.870.84Pro onlyL C M
M00498*71.0564365062663327.5266.6620.950.92Pro onlyL C M
M00499*71.0564365062663326.3596.5780.920.93Pro onlyL C M
M00500*71.0564365062663329.2097.8460.990.94Pro onlyL C M
MA008072.2264464962763215.1164.7210.850.83SPI-1L C M
M00624*70.2764865463163716.7597.5020.900.93Pro onlyL C M
M0025368.4264965663263915.3845.8300.920.94cap L C M
M00962*66.6764965763264024.6555.8350.800.85Pro onlyL C M
M00706*76.9266166964465217.5707.0230.850.83Pro onlyL C M
M0025376.3266967665265924.9524.7300.900.89cap L C M
M0008771.4367168265466519.2899.6260.900.91Ik-2 L C M
M00736*73.6867368065666326.1716.1710.820.82Pro onlyL C M
MA005672.2267367865666115.2625.2620.830.83MZF_1-4L C M
M00498*73.6867468165766423.5983.5980.810.81Pro onlyL C M
M00986*75.0067467965766215.6335.6330.900.90Pro onlyL C M
MA005675.0067467965766214.8464.8460.810.81MZF_1-4L C M
M00492*71.0567568265866526.6107.2380.850.87Pro onlyL C M
M00493*71.0567568265866526.5675.7020.900.86Pro onlyL C M
M00494*71.0567568265866526.5735.0520.890.83Pro onlyL C M
M00496*71.0567568265866524.1075.6920.810.88Pro onlyL C M
M00497*71.0567568265866527.6698.0630.981.00Pro onlyL C M
M00498*71.0567568265866524.6686.0970.850.90Pro onlyL C M
M00499*71.0567568265866523.8344.6910.810.85Pro onlyL C M
M00500*71.0567568265866524.8376.2360.840.89Pro onlyL C M
MA008075.0067568065866315.3725.3720.860.86SPI-1L C M
MA009875.0067568065866324.1224.1220.830.83c-ETSL C M
M0010672.5067668565966827.4695.8690.860.82CDP CR3+HD L C M
M0014772.5067668565966817.4795.9820.870.82HSF2 L C M
M00704*72.2267668165966415.1175.1170.820.82Pro onlyL C M
MA002770.7367668665966926.2456.2450.870.87EN-1L C M
MA003572.2267768266066524.9855.3770.880.91GATA-1L C M
MA003671.4367868266166524.0004.8730.850.90GATA-2L C M
M0025373.6868068766367025.2924.6920.910.89cap L C M
M00468*72.9768068666366925.1687.2660.830.94Pro onlyL C M
M00313*76.3268268966567226.5035.6730.910.87Pro onlyL C M
M00314*76.3268268966567226.5335.8670.910.87Pro onlyL C M
M00315*76.3268268966567226.4215.5960.910.87Pro onlyL C M
MA003777.7868569066867313.7913.7910.810.81GATA-3L C M
M00493*81.5868669366967624.3455.3770.800.85Pro onlyL C M
M00497*81.5868669366967625.5546.2520.880.92Pro onlyL C M
M00499*81.5868669366967624.4755.3750.840.87Pro onlyL C M
M0025378.9569770468068724.9082.8510.900.81cap L C M
M0025381.5869870568168814.3424.3250.870.87cap L C M
M0041983.3369971068269315.3804.9830.820.81MEIS1 L C M
M00794*83.3370171268469517.5545.9500.860.80Pro onlyL C M
MA009282.5070171068469326.2656.5120.810.82Thing1-E47L C M
M01008*82.0570271068569326.3996.3990.840.84Pro onlyL C M
M0018482.5070371268669526.8016.8010.820.82MyoD L C M
M00469*82.0570371168669418.0988.0980.930.93Pro onlyL C M
M00470*82.0570371168669416.4636.4630.850.85Pro onlyL C M
M00712*81.5870371068669316.1226.1220.820.82Pro onlyL C M
M00973*81.5870371068669326.3136.3130.820.82Pro onlyL C M
MA000382.0570371168669418.0988.0980.930.93AP2alphaL C M
M0003282.5070471368769616.5466.8100.820.83c-Ets-1(p54) L C M
M00339*82.2270471868770119.6928.3800.840.81Pro onlyL C M
M00678*82.5070571468869729.64311.1910.850.89Pro onlyL C M
M00695*81.0870571168869415.1865.1860.820.82Pro onlyL C M
M00698*81.5870571268869527.4057.4050.830.83Pro onlyL C M
M00726*80.5670571068869315.1055.1050.840.84Pro onlyL C M
M00743*81.5870571268869517.5667.5660.860.86Pro onlyL C M
M00971*81.5870571268869527.3887.3880.870.87Pro onlyL C M
MA010380.5670571068869325.3335.3330.840.84deltaEF1L C M
M00655*81.0870671268969527.0567.0560.880.88Pro onlyL C M
MA009880.5670671168969423.6743.6740.810.81c-ETSL C M
M00963*82.0570871669169928.0546.2880.910.85Pro onlyL C M
MA010984.2170871569169825.0207.5860.820.93RUSH1-alfaL C M
MA003987.5071272169570417.5296.2300.880.84GklfL C M
M00963*89.7471372169670428.5538.5750.920.92Pro onlyL C M
MA003987.5071372269670515.7235.6970.820.82GklfL C M
M00649*86.8471572269870518.7039.8110.870.91Pro onlyL C M
M00695*89.1971572169870415.0706.1470.810.86Pro onlyL C M
M0008788.1071672769971017.3267.5400.840.85Ik-2 L C M
MA002887.5071672569970816.5375.9090.830.81Elk-1L C M
M00706*89.7471772570070818.2857.5700.880.85Pro onlyL C M
MA003990.00717726700709110.06010.1990.950.96GklfL C M
MA008189.1971772370070615.6404.9110.830.81SPI-BL C M
M0008486.0571873070171317.5257.5250.810.81MZF1 L C M
M00428*89.4771872570170824.4134.4130.820.82Pro onlyL C M
M00720*89.7471872670170917.4427.4420.840.84Pro onlyL C M
M00736*89.4771872570170825.5825.5820.800.80Pro onlyL C M
M00649*89.4771972670270917.3897.3890.830.83Pro onlyL C M
M00971*89.4771972670270926.1096.1090.830.83Pro onlyL C M
M00986*88.8971972470270715.3925.3920.880.88Pro onlyL C M
MA009888.8971972470270723.6583.6580.810.81c-ETSL C M
MA011187.8071972970271217.5067.5060.810.81Spz1L C M
M00492*89.4772072770371026.5706.5700.840.84Pro onlyL C M
M00496*89.4772072770371023.9323.9320.800.80Pro onlyL C M
M00497*89.4772072770371026.9466.9460.950.95Pro onlyL C M
M00498*89.4772072770371023.8043.8040.810.81Pro onlyL C M
M00499*89.4772072770371024.8284.8280.850.85Pro onlyL C M
M00500*89.4772072770371027.6347.6340.930.93Pro onlyL C M
M00695*89.1972072670370914.9624.9620.810.81Pro onlyL C M
MA008088.8972072570370818.5798.5790.990.99SPI-1L C M
MA009888.8972072570370825.7775.7770.910.91c-ETSL C M
M00704*88.8972172670470915.1175.1170.820.82Pro onlyL C M
M00963*84.6272373170671427.6528.0270.890.91Pro onlyL C M
MA010388.8972372870671125.1595.1590.840.84deltaEF1L C M
M00747*83.7872473070771325.5655.5650.800.80Pro onlyL C M
MA008183.7872473070771315.2125.2120.820.82SPI-BL C M
MA009886.1172472970771223.6743.6740.810.81c-ETSL C M
M00962*84.6272573370871614.9084.9080.810.81Pro onlyL C M
M00497*84.2172673370971625.0835.0830.860.86Pro onlyL C M
M00498*84.2172673370971624.6683.8040.850.81Pro onlyL C M
M00499*84.2172673370971625.9106.5300.900.92Pro onlyL C M
M01010*84.4472774171072427.4249.3640.830.88Pro onlyL C M
M0037782.9372873871172119.4458.3320.900.86Pax-4 L C M
M0010183.7872973571271825.2494.6480.910.88CdxA L C M
M0016286.3673074371372626.7049.2650.820.89Oct-1 L C M
M00486*84.6273173971472224.9005.3950.840.86Pro onlyL C M
M0010086.4973373971672216.2694.7060.920.84CdxA L C M
M0010186.4973373971672214.5793.9790.880.86CdxA L C M
M0010086.4973474071772326.2694.0800.920.81CdxA L C M
M0025386.8473574271872524.1313.5310.860.84cap L C M
M00313*86.8473774472072728.4115.6311.000.87Pro onlyL C M
M00314*86.8473774472072728.3245.8230.990.87Pro onlyL C M
M00315*86.8473774472072728.2435.7630.990.87Pro onlyL C M
MA008986.1173874372172615.2645.2640.850.85TCF11-MafGL C M
M00967*84.6274074872373116.5816.3660.850.84Pro onlyL C M
M00963*82.0574174972473227.2125.4050.880.82Pro onlyL C M
MA005573.8174775873074118.4717.3340.830.80MyfL C M
M00624*75.6874875473173725.4916.2340.850.88Pro onlyL C M
M00497*71.0575175873474115.2875.2870.870.87Pro onlyL C M
M00499*71.0575175873474115.4405.4400.880.88Pro onlyL C M
M00500*71.0575175873474114.0924.0920.810.81Pro onlyL C M
M00624*72.9775175773474014.3144.3140.810.81Pro onlyL C M
M0025368.4275275973574224.3984.3980.880.88cap L C M
M00658*68.4275376073674327.8047.8040.870.87Pro onlyL C M
MA008072.2275375873674125.6285.6280.870.87SPI-1L C M
MA009872.2275375873674113.8223.8220.820.82c-ETSL C M
M00624*67.5775476073774325.2955.2950.850.85Pro onlyL C M
MA008167.5775476073774326.2326.2320.860.86SPI-BL C M
M00792*56.4178078876677416.9916.1020.910.87Pro onlyL C M
M0025352.6379380077978613.7043.1530.850.82cap L C M
M0025350.0079680378278915.2563.7150.910.85cap L M
M0010151.3583283881782315.1675.1670.910.91CdxA L C M
M0025352.6383283981782425.2466.6790.910.97cap L C M
M00913*51.2883384181882617.3037.3030.910.91Pro onlyL C M
M00313*52.6383484181982624.3595.5990.800.86Pro onlyL C M
M00314*52.6383484181982624.5045.6240.810.86Pro onlyL C M
M00315*52.6383484181982624.8795.9710.830.88Pro onlyL C M
M0025355.2684485182983612.6935.3310.800.92cap L C M
M00960*50.00901910881890110.2326.7090.960.84Pro onlyL M
M00496*50.0090391088389024.0624.1980.810.81Pro onlyL M
M00499*50.0090391088389027.1904.0260.950.82Pro onlyL M
MA008050.0090390888388814.2494.0450.810.80SPI-1L M
M0025352.6391291989289915.2355.2670.910.91cap L M
MA010352.7891391889389819.2624.6611.000.82deltaEF1L M
M0023658.709871002977992211.88512.2500.890.90Arnt L M
M0011961.36988100197899117.91010.9550.810.87Max L M
M0011961.36988100197899127.91010.9550.810.87Max L M
M0012161.369881001978991111.54513.4640.900.94USF L M
M0012161.369881001978991211.54513.4640.900.94USF L M
M0012261.36988100197899119.71810.6160.900.93USF L M
M0012261.36988100197899129.71810.6160.900.93USF L M
M00985*61.369881001978991113.60914.3560.930.94Pro onlyL M
M00985*61.369881001978991215.43313.6970.970.93Pro onlyL M
M0005564.299891000979990110.4408.4350.900.85N-Myc L M
M0005564.29989100097999028.37610.4050.850.90N-Myc L M
M0012364.299891000979990110.1158.3630.890.84c-Myc/Max L M
M0022063.41989999979989112.59913.9160.910.95SREBP-1 L M
M00717*60.00989100397999327.3756.8200.820.80Pro onlyL M
M00796*64.299891000979990110.6239.0920.900.86Pro onlyL M
M00796*64.29989100097999027.6529.0850.820.86Pro onlyL M
M00801*58.3398999497998414.8739.0440.820.99Pro onlyL M
M00976*61.5498999797998729.4718.4000.940.90Pro onlyL M
M01008*61.5498999797998728.40510.8530.890.97Pro onlyL M
MA005862.5098999897998818.0519.6210.850.89MaxL M
MA006760.5398999697998614.9988.2250.840.97Pax-2L M
M0007365.85990100098099026.3387.1920.820.84deltaEF1 L M
M0018765.00990999980989110.77010.7700.950.95USF L M
M0018765.00990999980989210.3399.7200.930.91USF L M
M0022065.859901000980990212.12115.1280.900.98SREBP-1 L M
M00322*65.0099099998098916.3267.6370.810.85Pro onlyL M
M00322*65.0099099998098928.1186.3260.870.81Pro onlyL M
M0004165.7999199898198816.5276.5270.810.81CRE-BP1/c-Jun L M
M0004165.7999199898198826.5276.5270.810.81CRE-BP1/c-Jun L M
M0021765.7999199898198819.6459.6450.960.96USF L M
M0021765.7999199898198829.6459.6450.960.96USF L M
M0024064.8699199798198716.7856.7850.850.85Nkx2-5 L M
M00799*64.8699199798198727.7907.7900.890.89Pro onlyL M
M01029*65.79991998981988110.35110.3510.950.95Pro onlyL M
M01029*65.79991998981988210.35110.3510.950.95Pro onlyL M
MA005867.509911000981990210.93011.9260.930.96MaxL M
MA009364.86991997981987210.92310.9230.980.98USFL M
M0024067.5799299898298826.7856.7850.850.85Nkx2-5 L M
M00726*66.6799299798298718.1338.1331.001.00Pro onlyL M
M00726*66.6799299798298728.1338.1331.001.00Pro onlyL M
M00799*67.5799299898298817.7907.7900.890.89Pro onlyL M
M00976*69.23992100098299017.5956.8750.870.85Pro onlyL M
M01008*69.239921000982990110.4049.1300.950.92Pro onlyL M
MA000466.67992997982987110.35110.3511.001.00ARNTL M
MA000466.67992997982987210.35110.3511.001.00ARNTL M
MA000666.6799299798298714.8914.8910.800.80Ahr-ARNTL M
MA000666.6799299798298724.8914.8910.800.80Ahr-ARNTL M
MA009367.57992998982988110.92310.9230.980.98USFL M
MA010366.6799299798298716.1566.1560.880.88deltaEF1L M
MA010366.6799299798298726.1566.1560.880.88deltaEF1L M
MA010466.67992997982987110.53310.5331.001.00n-MYCL M
MA010466.67992997982987210.53310.5331.001.00n-MYCL M
MA006768.42993100098399028.5337.1170.980.92Pax-2L M
MA000266.671000100899099817.4325.6780.850.80AML-1L M
M00539*70.00100110209911010117.39413.8240.960.89Pro onlyL C M
M00539*70.00100110209911010217.39413.8240.960.89Pro onlyL C M
M00615*70.00100110209911010112.27311.6740.890.88Pro onlyL C M
M00615*70.00100110209911010212.27311.6740.890.88Pro onlyL C M
M0011371.4310031014993100417.3796.9640.820.81CREB L C M
M0023671.7410031018993100819.97810.1760.860.86Arnt L C M
M0023671.74100310189931008214.74712.3550.950.90Arnt L C M
M0028572.0910031015993100526.1796.3250.830.83TCF11 L C M
M00916*72.7310031016993100627.8999.5340.810.85Pro onlyL C M
M0011972.73100410179941007111.35611.3520.880.88Max L C M
M0011972.73100410179941007211.35611.3520.880.88Max L C M
M0012172.73100410179941007114.26113.5950.960.94USF L C M
M0012172.73100410179941007214.26113.5950.960.94USF L C M
M0012272.73100410179941007111.75710.2450.960.92USF L C M
M0012272.73100410179941007211.75710.2450.960.92USF L C M
M00917*73.1710041014994100417.8317.9270.830.84Pro onlyL C M
M00985*72.73100410179941007114.36212.7310.940.91Pro onlyL C M
M00985*72.73100410179941007215.33515.7980.970.98Pro onlyL C M
M0005573.8110051016995100618.5809.1910.850.87N-Myc L C M
M0005573.8110051016995100629.7938.4350.890.85N-Myc L C M
M0012373.8110051016995100618.8298.5690.850.85c-Myc/Max L C M
M0012373.8110051016995100628.1466.8410.830.80c-Myc/Max L C M
M0022073.17100510159951005114.15016.0870.951.00SREBP-1 L C M
M00796*73.81100510169951006111.76611.2320.930.91Pro onlyL C M
M00796*73.8110051016995100629.6199.0920.870.86Pro onlyL C M
M00976*71.7910051013995100328.0537.3320.890.86Pro onlyL C M
M01008*71.79100510139951003211.85510.5800.990.96Pro onlyL C M
MA005872.50100510149951004111.41312.4090.950.98MaxL C M
MA006771.0510051012995100217.8326.4160.950.90Pax-2L C M
M0018775.00100610159961005111.7959.7200.980.91USF L C M
M0018775.00100610159961005211.79510.7700.980.95USF L C M
M0022075.61100610169961006213.19113.9160.930.95SREBP-1 L C M
M00322*75.0010061015996100517.8986.3260.860.81Pro onlyL C M
M00322*75.0010061015996100527.8987.6370.860.85Pro onlyL C M
M0004173.6810071014997100416.5276.5270.810.81CRE-BP1/c-Jun L C M
M0004173.6810071014997100426.5276.5270.810.81CRE-BP1/c-Jun L C M
M0021773.6810071014997100419.6459.6450.960.96USF L C M
M0021773.6810071014997100429.6459.6450.960.96USF L C M
M0024072.9710071013997100316.7856.7850.850.85Nkx2-5 L C M
M00799*72.9710071013997100327.7907.7900.890.89Pro onlyL C M
M00981*74.3610071015997100526.1296.1290.800.80Pro onlyL C M
M01029*73.68100710149971004110.35110.3510.950.95Pro onlyL C M
M01029*73.68100710149971004210.35110.3510.950.95Pro onlyL C M
MA005875.00100710169971006210.9309.6210.930.89MaxL C M
MA009372.97100710139971003210.92310.9230.980.98USFL C M
M0024072.9710081014998100426.7856.7850.850.85Nkx2-5 L C M
M00726*72.2210081013998100318.1338.1331.001.00Pro onlyL C M
M00726*72.2210081013998100328.1338.1331.001.00Pro onlyL C M
M00799*72.9710081014998100417.7907.7900.890.89Pro onlyL C M
M00976*74.3610081016998100617.5958.4000.870.90Pro onlyL C M
M01008*74.36100810169981006110.40410.8530.950.97Pro onlyL C M
MA000472.22100810139981003110.35110.3511.001.00ARNTL C M
MA000472.22100810139981003210.35110.3511.001.00ARNTL C M
MA000672.2210081013998100314.8914.8910.800.80Ahr-ARNTL C M
MA000672.2210081013998100324.8914.8910.800.80Ahr-ARNTL C M
MA009372.97100810149981004110.92310.9230.980.98USFL C M
MA010372.2210081013998100316.1566.1560.880.88deltaEF1L C M
MA010372.2210081013998100326.1566.1560.880.88deltaEF1L C M
MA010472.22100810139981003110.53310.5331.001.00n-MYCL C M
MA010472.22100810139981003210.53310.5331.001.00n-MYCL C M
MA006773.6810091016999100628.5338.2250.980.97Pax-2L C M
MA008972.22101010151000100516.0406.0400.880.88TCF11-MafGL C M
M00801*72.22101110161001100626.5589.0440.890.99Pro onlyL C M
MA005655.56102310281013101818.5105.0040.970.81MZF_1-4L M
M0025350.00104410511032103914.7304.9520.890.90cap L C M
MA009852.78105810631049105423.8393.6580.820.81c-ETSL C
M00986*58.33106210671053105815.5303.9820.890.82Pro onlyL C
M00986*61.11106310681054105913.8344.9180.810.86Pro onlyL C
M00803*55.56106710721058106325.9215.6580.860.85Pro onlyL C M
M00986*55.56107410791065107025.4304.3460.890.84Pro onlyL C M
MA005655.56107410791065107024.8464.8460.810.81MZF_1-4L C M

MAVID

MAVID ALIGNMENT

                                                10        20                                     30        40 
seq1      -----------ttttagtag-------------------atacaaggtttcacca-----------------------------tgttggtcagcctggt
                     |||| || |                   | ||||||| || | |                             ||| |  |||  ||| 
seq2      ccacattcgtttttttgtggtctgtgtgtttctgctttgagacaaggtctctctacatattgctagctgccccaaagtttgttctgtagaccaggatggc
                  10        20        30        40        50        60        70        80        90       100

                 50        60        70        80           90       100       110       120       130       1
seq1      ctcgaactcctgacctCGTGATCCGCccgcctcggcctcccaaag---tgctgggattacgggcgtgagccaccgcacccggctaatcacggcattttta
          ||| ||      ||   |  |||| || || || |||||    ||   |||| | || |  |  ||| | ||               || || || | | 
seq2      ctcaaa-----tacacAGACATCCTCctgcttctgcctc----aggcctgctagaatcaaagttgtgggaca---------------catggtatgtctg
                      110       120       130           140       150       160                      170      

          40       150       160       170       180            190         200       210       220       230 
seq1      taagccttgtgatttctgtgattctaatgtttagattctaatgc-----ttagccagggttga--gaaccaccgatttaatccaatcccttctcctagtt
           |  |                              || ||||||     |||||   ||||    | | | | | |  | |||                 
seq2      cacac------------------------------ttgtaatgcaccccttagctccggttacttgtagcgctggtggattcc-----------------
           180                                     190       200       210       220                        23

                240       250       260       270       280       290       300       310       320       330 
seq1      ttactaaagagaaaactataacctagaatggtgagcaacttgcccaaagtcacccaacatgttagtgcaaggtgcacCGAGAGAGATTGTaccagtAGCA
          |  | |    |||||  | ||           ||||     |  || ||           |  || |  ||    |  ||||||||  | | ||  ||||
seq2      tggccaccatgaaaagcacaa----------ggagcctaggggacagag----------agagagagagagagagagAGAGAGAGAGAGAaacaacAGCA
          0       240       250                 260                 270       280       290       300       31

                340       350       360       370       380       390       400       410       420       430 
seq1      AGAATATgctcATGATGTTTATAATTGTTCTCGCTGGAGTTAATCCCGGAAGCATTTCTTTTtagttcacagaggcCTTATATAAATTACTTTTTACTTT
          | ||  ||   ||| ||||||||||| |||| | |||| ||| ||| ||||||||| ||  |||| ||  ||| ||  | ||||| |||| ||| |||||
seq2      ATAAATTg---ATGGTGTTTATAATTTTTCTAGTTGGAATTAGTCCTGGAAGCATTCCTCCTtag-tcggagaagcACTGTATAATTTACCTTTCACTTT
          0          320       330       340       350       360       370        380       390       400     

                 440       450       460       470        480       490       500       510            520    
seq1      GGCAC-AGCACTTACGCTTCTGCtaacaCTGAAATGGGTTCGCATTCC-TGACCACAAAAGGACAGAGATGAAAttCTACATTCAC-----aCAGCCCGC
          ||||  ||||||||||||||||| |  ||| ||||||||||||||||| |||||||||||||||||||||  |  |   |||||||     || ||||||
seq2      GGCAGtAGCACTTACGCTTCTGCcacgaCTAAAATGGGTTCGCATTCCcTGACCACAAAAGGACAGAGATAGATctGCGCATTCACcactcaCTGCCCGC
            410       420       430       440       450       460       470       480       490       500     

             530       540       550       560       570       580       590       600        610       620   
seq1      CAAGTTAGCCAAGCTCCCTAGGAGGCTGTCTGAAGTGCCTAAAATGCTTCTCTACAATGATCACCCAGAGCTGAGAGA-cttcAGTGGGGTAGTGAGAAG
           |  ||||| ||||||||||| ||||||  ||| |||||||||||||| ||||||| ||||||||||||||||||||| | || |||| |  ||||||||
seq2      AACATTAGCAAAGCTCCCTAGAAGGCTGCTTGAGGTGCCTAAAATGCTGCTCTACAGTGATCACCCAGAGCTGAGAGAacctcGGTGGAGAGGTGAGAAG
            510       520       530       540       550       560       570       580       590       600     

               630       640       650       660       670       680       690       700       710       720  
seq1      A-aaGAGGGTTGGGAGAGACAGGAAAGCATCCTCTcctTGAGGGAAGGAACTGGGAATCAACTGAGAACCAgctAGCACTGCCAGGAGGTGAGGAGAGGG
          | ||||||| ||||| | |   |||||||| |||| || | | || | | ||||||||| |||||||| | ||  ||| ||||||||||| ||| |||||
seq2      AcaaGAGGGCTGGGAAATAAGAGAAAGCATTCTCTtctAGGGAGAGGAAGCTGGGAATCCACTGAGAATCGgccGGCATTGCCAGGAGGTAAGGTGAGGG
            610       620       630       640       650       660       670       680       690       700     

               730       740       750       760       770          780       790       800         810       
seq1      AAGGAGAATAATTTAAATGAGGCCAGGGAGCTTCTGCTccctcaatta---aacggtgatAGACGGCCTgacaCCACCAGCCCTcg--aagcctgagatc
          |||||||| ||||| ||||||  ||| ||||||||||| ||  | | |   ||  ||  | ||| || | |   |||||  ||||   || || || | |
seq2      AAGGAGAAGAATTTCAATGAGTTCAGAGAGCTTCTGCTaccctagtaacagaagtgtagtGGACAGCATcaggACACCAATCCTctcaaaacccgacagc
            710       720       730       740       750       760       770       780       790       800     

          820       830       840       850         860       870       880       890       900       910     
seq1      cacaggaaatgttaAAAACTGGCTtgGCAATATAagta--ttagaaaatacttcttccaacactcaccaaaaactaagctcccaaTAAAGAACACtTCAC
          || || |  ||   ||||||| ||   ||  || | ||  |  |||||   |||      |   | ||| ||||| ||| | || ||  |||||  ||||
seq2      cagagcatgtg---AAAACTGACTctTCAGCATGactaaatgcgaaaagtgttc------ctgactccagaaactgagc-ctcatTAGCGAACAGcTCAC
            810          820       830       840       850             860       870        880       890     

            920         930       940            950       960       970           980       990      1000    
seq1      CTGCcctccg--caaccctctacctctcttc-----cccgccaagatcttcacccaaggtctcaa----gagggcggttcCCAACCTCACGTGACACAGC
          |  ||   |   |||||||| || || || |     | |  ||| | |  |  |||    |  ||    ||||| || | |   | |||||||| || ||
seq2      CCACcaagcaaccaaccctccacttcgctcctttagctcctcaataccaaccaccagatgccaaaagcagagggaggct-CTTGCGTCACGTGATACTGC
            900       910       920       930       940       950       960       970        980       990    

            1010      1020      1030      1040        1050      1060         1070      1080      1090         
seq1      GGTCACGTGACATGGCccCGGGGAgccgaggtgagcgt--tCCAGCTTCcggagccggaggg---ggCCCGGCgTACCCAgcccccagcccgacgtgacc
          | |||||||||     || || ||||| ||    || |  ||||| | | | ||||  ||||   || ||| ||| |||| | ||||||| |||  ||||
seq2      GATCACGTGACGCCTTccGGGTGAgccaag----gcatagtCCAGTTCCtgcagccttagggaggggTCCGCCgTGCCCA-cacccagccagactcgacc
            1000      1010      1020          1030      1040      1050      1060      1070       1080         

MAVID ALIGNED HITS

MatrixIdentitySeq1 fromSeq1 toSeq2 fromSeq2 toStrandScore1Score2Rel.Score1Rel.Score2FactorFound by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M0007550.00586711212124.6235.5710.810.85GATA-1 M L
M0007650.00586711212125.8936.6990.870.90GATA-2 M L
MA003552.78606511411923.7205.9660.820.94GATA-1M L
MA003651.43616511511925.0475.9780.910.96GATA-2M L
MA009850.00616611512015.7387.2290.910.97c-ETSM L
MA003755.5630931428729214.5305.2860.840.87GATA-3M C L
M0025360.5331031728829522.8762.8760.810.81cap M C L
MA003758.3331131628929415.2865.2860.870.87GATA-3M C L
M0025357.8931432129229923.8962.8760.860.81cap M C L
MA003761.1131532029329817.4225.2860.960.87GATA-3M C L
M00624*59.4632833430631214.9727.3310.830.93Pro onlyM C L
M0010156.7633133730931523.7465.4050.850.92CdxA M C L
M00499*57.8933133830931626.6784.0690.930.82Pro onlyM C L
M0026872.73343356318331212.86310.3030.930.86XFD-2 M C L
M0029373.91343358318333210.46511.5410.840.87Freac-7 M C L
M00472*73.1734335331832829.51610.1560.900.91Pro onlyM C L
M00476*72.7334335631833119.5409.5400.800.80Pro onlyM C L
M00792*71.7934335131832624.5355.1370.800.83Pro onlyM C L
M0028972.09344356319331110.87710.5700.890.88HFH-3 M C L
M0029472.0934435631933119.8419.5130.860.85HFH-8 M C L
MA004073.17344354319329112.2289.7130.920.85HFH-1M C L
MA004271.43344355319330110.61710.2170.890.88HFH-3M C L
M0014872.9734535132032626.7827.3440.910.93SRY M C L
M00473*75.0034535432032929.22410.1970.900.93Pro onlyM C L
M00489*73.8134535632033125.7855.7850.810.81Pro onlyM C L
M00791*74.4234535732033227.0376.7350.820.81Pro onlyM C L
M0041574.3634635432132915.7145.2820.830.81AREB6 M C L
M00486*74.3634635432132925.6987.2040.870.94Pro onlyM C L
MA003173.6834635332132829.4127.8640.900.84FREAC-4M C L
M0010172.9734735332232824.4194.4190.880.88CdxA M C L
M00402*72.5034735632233128.5728.5720.910.91Pro onlyM C L
M00471*73.6834735432232929.1269.1260.900.90Pro onlyM C L
M00498*73.6834735432232913.9653.9650.820.82Pro onlyM C L
M00724*73.1734735732233219.4219.4210.890.89Pro onlyM C L
MA003373.6834735432232914.3074.3070.800.80FREAC-7M C L
MA003373.6834735432232924.8134.8130.820.82FREAC-7M C L
M0010075.6834835432332915.6865.6860.890.89CdxA M C L
M0010175.6834835432332915.1885.1880.910.91CdxA M C L
MA008474.3634835632333116.2356.2350.820.82SRYM C L
M0009676.9234935732433226.2126.2120.820.82Pbx-1 M C L
M0013776.7434936132433615.6675.5100.810.80Oct-1 M C L
M00489*76.1934936032433517.0637.0630.850.85Pro onlyM C L
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MA002877.5037438334935819.5076.5040.930.83Elk-1M C L
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MA008075.0037838335335818.7116.4831.000.91SPI-1M C L
MA009875.0037838335335827.7976.3001.000.93c-ETSM C L
M0027270.0038139035636515.2575.2570.810.81p53 M C L
M0027270.0038139035636526.3675.9300.840.83p53 M C L
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MA003965.0038439335936828.1526.1800.900.84GklfM C L
MA010965.7938439135936615.5906.2190.850.87RUSH1-alfaM C L
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M0039672.9741542138939526.1253.6740.940.81En-1 M C L
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MA003962.5042143039540426.4708.7670.850.91GklfM C L
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M0025368.4243844541342014.0864.0860.860.86cap M C L
M0039566.6743844641342125.7355.7350.910.91HOXA3 M C L
M00484*67.5043844741342227.0207.0200.840.84Pro onlyM C L
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M00497*65.7943944641442114.5574.5570.840.84Pro onlyM C L
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MA006267.5043944841442328.0588.0580.820.82NRF-2M C L
MA006367.5743944541442026.5556.5550.890.89NkxM C L
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MA008170.2744244841742325.7855.7850.840.84SPI-BM C L
MA003273.6844345041842524.7644.7640.850.85FREAC-3M C L
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M00497*76.3244545242042715.9795.9790.900.90Pro onlyM C L
M00498*76.3244545242042714.6684.6680.850.85Pro onlyM C L
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M00500*76.3244545242042714.0924.0920.810.81Pro onlyM C L
M0025376.3244645342142824.3984.3980.880.88cap M C L
MA008077.7844745242242725.6285.6280.870.87SPI-1M C L
MA009877.7844745242242713.8223.8220.820.82c-ETSM C L
M0010083.7845946543444025.2154.2460.870.82CdxA M C L
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M0039678.3846146743644215.1854.1460.890.83En-1 M C L
M00640*78.9546146843644316.8267.6470.870.91Pro onlyM C L
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M00315*76.3246246943744425.4965.4960.860.86Pro onlyM C L
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MA008069.4446847344344824.0454.0450.800.80SPI-1M C L
M00313*68.4247047744545215.3085.3080.850.85Pro onlyM L
M00314*68.4247047744545215.6245.6240.860.86Pro onlyM L
M00315*68.4247047744545215.0815.0810.840.84Pro onlyM L
M00750*67.5747247844745325.1905.1900.820.82Pro onlyM L
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MA000271.79480488456464212.29512.2950.990.99AML-1M C L
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M0028567.4448149345746925.5395.5390.810.81TCF11 M C L
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M0025268.8948249645847216.1556.1550.810.81TATA M C L
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MA007869.2348349145946725.9555.9550.820.82SOX17M C L
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M00963*74.3648849646447229.7269.7260.960.96Pro onlyM C L
M0025376.3248949646547223.2183.2180.830.83cap M C L
M00921*76.3248949646547229.4229.4220.970.97Pro onlyM C L
MA009875.0048949446547023.6743.6740.810.81c-ETSM C L
M00701*79.4949049846647427.3467.3460.820.82Pro onlyM C L
M0025381.5849249946847512.8582.8580.810.81cap M C L
M00462*75.0049450347047915.5006.2910.840.88Pro onlyM C L
M0007774.3649550347147915.6217.2100.820.88GATA-3 M C L
MA010976.3249550247147825.6196.7840.850.90RUSH1-alfaM C L
M00789*75.6849650247247815.3128.8100.830.96Pro onlyM C L
MA003577.7849650147247715.3156.0660.900.94GATA-1M C L
MA003680.0049650047247615.5596.2320.940.98GATA-2M C L
MA003777.7849650147247714.4148.3880.831.00GATA-3M C L
M00313*57.8950651348248915.8805.6200.880.87Pro onlyM C L
M00314*57.8950651348248915.7605.9380.870.88Pro onlyM C L
M00315*57.8950651348248915.6285.3900.870.86Pro onlyM C L
M0025352.6350851548449114.2904.7500.870.89cap M C L
M00500*52.6350851548449114.3185.0880.820.85Pro onlyM C L
M00704*52.7850951448549025.1175.1170.820.82Pro onlyM C L
M00716*57.8951752449850525.5705.5700.810.81Pro onlyM C L
M00986*58.3351852349950424.0105.8280.820.90Pro onlyM C L
M00803*63.8952052550150628.2434.5430.970.80Pro onlyM C L
M00428*68.4252152850250927.5474.4570.950.83Pro onlyM C L
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M0011675.0052653950752017.0048.6730.820.88C/EBPalpha M C L
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M00624*81.0853654251752315.4915.4910.850.85Pro onlyM C L
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M00977*80.4953854851952918.1427.6660.820.81Pro onlyM C L
M00986*77.7853854351952425.7685.7680.900.90Pro onlyM C L
MA009877.7853854351952413.6583.6580.810.81c-ETSM C L
MA005677.7853954452052524.9164.9160.810.81MZF_1-4M C L
M0039582.0554154952253014.8214.8210.860.86HOXA3 M C L
M00733*86.6754455852553927.9889.1350.810.83Pro onlyM C L
M0025386.8454655352753425.4375.9670.920.94cap M C L
M0041587.1855055853153915.4095.7410.810.83AREB6 M C L
M00313*86.8455255953354025.3384.5800.850.81Pro onlyM C L
M00314*86.8455255953354025.1814.7280.840.82Pro onlyM C L
M00315*86.8455255953354025.3074.5110.850.81Pro onlyM C L
M0025386.8455556253654324.0583.6120.860.84cap M C L
M0017285.3755856853954916.3386.7000.800.81AP-1 M C L
M0017385.3755856853954916.5776.7710.800.81AP-1 M C L
M0018885.3755856853954916.9296.9290.810.81AP-1 M C L
MA009984.2155956654054717.0737.0730.840.84c-FOSM C L
M0010086.4956256854354924.3514.3510.820.82CdxA M C L
M0010186.4956256854354923.9593.9590.860.86CdxA M C L
M0039587.1856257054355115.6425.6420.910.91HOXA3 M C L
M0039587.1856257054355124.6534.6530.860.86HOXA3 M C L
M00496*86.8456256954355024.6874.6870.830.83Pro onlyM C L
M00690*86.8456256954355015.5595.5590.840.84Pro onlyM C L
M0010086.4956356954455024.2464.2460.820.82CdxA M C L
M00486*87.1856357154455214.1564.1560.810.81Pro onlyM C L
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M0025386.8456457154555224.2654.2650.870.87cap M C L
M00624*86.4956657254755326.3266.3260.890.89Pro onlyM C L
M00630*87.1856757554855626.3825.1910.850.80Pro onlyM C L
MA001490.0056858754956829.1409.0660.810.81BsapM C L
M00690*94.7457558255656315.8947.0360.850.90Pro onlyM C L
M0025394.7457758455856524.6114.6280.890.89cap M C L
MA003294.7457758455856523.9165.2380.800.88FREAC-3M C L
MA006794.7457958656056725.4075.9760.860.88Pax-2M C L
M0007590.0058058956157025.1995.1990.840.84GATA-1 M C L
M0037885.7158059156157216.6715.5070.840.80Pax-4 M C L
M00462*90.0058058956157015.8724.9330.860.82Pro onlyM C L
MA003694.2958258656356714.1744.1740.860.86GATA-2M C L
M00448*84.6258359156457228.5158.5150.900.90Pro onlyM C L
M00449*84.6258359156457228.5028.5020.890.89Pro onlyM C L
M00450*84.6258359156457229.7119.7110.940.94Pro onlyM C L
M00717*80.0058359756457827.5147.5140.830.83Pro onlyM C L
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M00624*86.4958459056557114.5244.5240.810.81Pro onlyM C L
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M0025381.5858559256657314.5334.5330.880.88cap M C L
MA005686.1158559056657125.0045.0040.810.81MZF_1-4M C L
M00800*76.0958660156758216.9926.9920.800.80Pro onlyM C L
M00986*83.3358659156757225.8075.8070.900.90Pro onlyM C L
MA000683.3358659156757225.2975.2970.820.82Ahr-ARNTM C L
MA010383.3358659156757214.6614.6610.820.82deltaEF1M C L
M00468*78.3858859456957524.6434.6430.800.80Pro onlyM C L
M0025378.9558959657057713.6873.6870.850.85cap M C L
M0017575.0059059957158029.5349.5340.930.93AP-4 M C L
M0017675.0059059957158028.6458.6450.870.87AP-4 M C L
M00927*76.9259059857157915.7945.7940.810.81Pro onlyM C L
M0025376.3259159857257926.0096.0090.940.94cap M C L
M00632*73.8159160257258317.0247.0240.800.80Pro onlyM C L
M0014171.7959460257558316.8216.8210.830.83Lyf-1 M C L
MA003772.2259660157758214.9904.9900.860.86GATA-3M C L
M0008350.0060761458959616.7716.3400.840.82MZF1 M L
M00690*50.0060761458959625.2755.5040.830.84Pro onlyM L
MA005652.7860961459159614.9894.9160.810.81MZF_1-4M C L
M0025355.2661261959460125.7925.5130.930.92cap M C L
M0034860.0061562459760617.9316.9650.840.81GATA-2 M C L
MA003763.8961762259960413.7913.7910.810.81GATA-3M C L
MA008061.1161862360060515.4965.4960.870.87SPI-1M C L
M00933*57.5062763661061927.9069.6830.820.87Pro onlyM C L
M0000857.5062863761162016.3938.6640.810.89Sp1 M C L
M0025355.2662863561161823.2695.2560.830.91cap M C L
M00720*56.4162863661161917.81010.2790.850.94Pro onlyM C L
MA007957.5062863761162016.5328.2740.810.88SP1M C L
M0037859.5262964061262326.5147.7960.840.88Pax-4 M C L
M0008761.9063064161362417.0648.6010.840.88Ik-2 M C L
M0014161.54631639614622110.5928.3540.950.88Lyf-1 M C L
MA005663.8963263761562015.8385.2620.850.83MZF_1-4M C L
M00986*63.8963363861662116.0095.6330.910.90Pro onlyM C L
MA010971.0563664361962624.6115.6600.810.85RUSH1-alfaM C L
MA003975.0064064962363215.1779.1390.810.93GklfM C L
M00486*71.7964365162663415.6155.7950.870.88Pro onlyM C L
M00493*71.0564365062663325.8304.5950.870.81Pro onlyM C L
M00496*71.0564365062663326.8896.2130.930.90Pro onlyM C L
M00497*71.0564365062663325.3484.6810.870.84Pro onlyM C L
M00498*71.0564365062663327.5266.6620.950.92Pro onlyM C L
M00499*71.0564365062663326.3596.5780.920.93Pro onlyM C L
M00500*71.0564365062663329.2097.8460.990.94Pro onlyM C L
MA008072.2264464962763215.1164.7210.850.83SPI-1M C L
M00624*70.2764865463163716.7597.5020.900.93Pro onlyM C L
M0025368.4264965663263915.3845.8300.920.94cap M C L
M00962*66.6764965763264024.6555.8350.800.85Pro onlyM C L
M00706*76.9266166964465217.5707.0230.850.83Pro onlyM C L
M0025376.3266967665265924.9524.7300.900.89cap M C L
M0008771.4367168265466519.2899.6260.900.91Ik-2 M C L
M00736*73.6867368065666326.1716.1710.820.82Pro onlyM C L
MA005672.2267367865666115.2625.2620.830.83MZF_1-4M C L
M00498*73.6867468165766423.5983.5980.810.81Pro onlyM C L
M00986*75.0067467965766215.6335.6330.900.90Pro onlyM C L
MA005675.0067467965766214.8464.8460.810.81MZF_1-4M C L
M00492*71.0567568265866526.6107.2380.850.87Pro onlyM C L
M00493*71.0567568265866526.5675.7020.900.86Pro onlyM C L
M00494*71.0567568265866526.5735.0520.890.83Pro onlyM C L
M00496*71.0567568265866524.1075.6920.810.88Pro onlyM C L
M00497*71.0567568265866527.6698.0630.981.00Pro onlyM C L
M00498*71.0567568265866524.6686.0970.850.90Pro onlyM C L
M00499*71.0567568265866523.8344.6910.810.85Pro onlyM C L
M00500*71.0567568265866524.8376.2360.840.89Pro onlyM C L
MA008075.0067568065866315.3725.3720.860.86SPI-1M C L
MA009875.0067568065866324.1224.1220.830.83c-ETSM C L
M0010672.5067668565966827.4695.8690.860.82CDP CR3+HD M C L
M0014772.5067668565966817.4795.9820.870.82HSF2 M C L
M00704*72.2267668165966415.1175.1170.820.82Pro onlyM C L
MA002770.7367668665966926.2456.2450.870.87EN-1M C L
MA003572.2267768266066524.9855.3770.880.91GATA-1M C L
MA003671.4367868266166524.0004.8730.850.90GATA-2M C L
M0025373.6868068766367025.2924.6920.910.89cap M C L
M00468*72.9768068666366925.1687.2660.830.94Pro onlyM C L
M00313*76.3268268966567226.5035.6730.910.87Pro onlyM C L
M00314*76.3268268966567226.5335.8670.910.87Pro onlyM C L
M00315*76.3268268966567226.4215.5960.910.87Pro onlyM C L
MA003777.7868569066867313.7913.7910.810.81GATA-3M C L
M00493*81.5868669366967624.3455.3770.800.85Pro onlyM C L
M00497*81.5868669366967625.5546.2520.880.92Pro onlyM C L
M00499*81.5868669366967624.4755.3750.840.87Pro onlyM C L
M0025378.9569770468068724.9082.8510.900.81cap M C L
M0025381.5869870568168814.3424.3250.870.87cap M C L
M0041983.3369971068269315.3804.9830.820.81MEIS1 M C L
M00794*83.3370171268469517.5545.9500.860.80Pro onlyM C L
MA009282.5070171068469326.2656.5120.810.82Thing1-E47M C L
M01008*82.0570271068569326.3996.3990.840.84Pro onlyM C L
M0018482.5070371268669526.8016.8010.820.82MyoD M C L
M00469*82.0570371168669418.0988.0980.930.93Pro onlyM C L
M00470*82.0570371168669416.4636.4630.850.85Pro onlyM C L
M00712*81.5870371068669316.1226.1220.820.82Pro onlyM C L
M00973*81.5870371068669326.3136.3130.820.82Pro onlyM C L
MA000382.0570371168669418.0988.0980.930.93AP2alphaM C L
M0003282.5070471368769616.5466.8100.820.83c-Ets-1(p54) M C L
M00339*82.2270471868770119.6928.3800.840.81Pro onlyM C L
M00678*82.5070571468869729.64311.1910.850.89Pro onlyM C L
M00695*81.0870571168869415.1865.1860.820.82Pro onlyM C L
M00698*81.5870571268869527.4057.4050.830.83Pro onlyM C L
M00726*80.5670571068869315.1055.1050.840.84Pro onlyM C L
M00743*81.5870571268869517.5667.5660.860.86Pro onlyM C L
M00971*81.5870571268869527.3887.3880.870.87Pro onlyM C L
MA010380.5670571068869325.3335.3330.840.84deltaEF1M C L
M00655*81.0870671268969527.0567.0560.880.88Pro onlyM C L
MA009880.5670671168969423.6743.6740.810.81c-ETSM C L
M00963*82.0570871669169928.0546.2880.910.85Pro onlyM C L
MA010984.2170871569169825.0207.5860.820.93RUSH1-alfaM C L
MA003987.5071272169570417.5296.2300.880.84GklfM C L
M00963*89.7471372169670428.5538.5750.920.92Pro onlyM C L
MA003987.5071372269670515.7235.6970.820.82GklfM C L
M00649*86.8471572269870518.7039.8110.870.91Pro onlyM C L
M00695*89.1971572169870415.0706.1470.810.86Pro onlyM C L
M0008788.1071672769971017.3267.5400.840.85Ik-2 M C L
MA002887.5071672569970816.5375.9090.830.81Elk-1M C L
M00706*89.7471772570070818.2857.5700.880.85Pro onlyM C L
MA003990.00717726700709110.06010.1990.950.96GklfM C L
MA008189.1971772370070615.6404.9110.830.81SPI-BM C L
M0008486.0571873070171317.5257.5250.810.81MZF1 M C L
M00428*89.4771872570170824.4134.4130.820.82Pro onlyM C L
M00720*89.7471872670170917.4427.4420.840.84Pro onlyM C L
M00736*89.4771872570170825.5825.5820.800.80Pro onlyM C L
M00649*89.4771972670270917.3897.3890.830.83Pro onlyM C L
M00971*89.4771972670270926.1096.1090.830.83Pro onlyM C L
M00986*88.8971972470270715.3925.3920.880.88Pro onlyM C L
MA009888.8971972470270723.6583.6580.810.81c-ETSM C L
MA011187.8071972970271217.5067.5060.810.81Spz1M C L
M00492*89.4772072770371026.5706.5700.840.84Pro onlyM C L
M00496*89.4772072770371023.9323.9320.800.80Pro onlyM C L
M00497*89.4772072770371026.9466.9460.950.95Pro onlyM C L
M00498*89.4772072770371023.8043.8040.810.81Pro onlyM C L
M00499*89.4772072770371024.8284.8280.850.85Pro onlyM C L
M00500*89.4772072770371027.6347.6340.930.93Pro onlyM C L
M00695*89.1972072670370914.9624.9620.810.81Pro onlyM C L
MA008088.8972072570370818.5798.5790.990.99SPI-1M C L
MA009888.8972072570370825.7775.7770.910.91c-ETSM C L
M00704*88.8972172670470915.1175.1170.820.82Pro onlyM C L
M00963*84.6272373170671427.6528.0270.890.91Pro onlyM C L
MA010388.8972372870671125.1595.1590.840.84deltaEF1M C L
M00747*83.7872473070771325.5655.5650.800.80Pro onlyM C L
MA008183.7872473070771315.2125.2120.820.82SPI-BM C L
MA009886.1172472970771223.6743.6740.810.81c-ETSM C L
M00962*84.6272573370871614.9084.9080.810.81Pro onlyM C L
M00497*84.2172673370971625.0835.0830.860.86Pro onlyM C L
M00498*84.2172673370971624.6683.8040.850.81Pro onlyM C L
M00499*84.2172673370971625.9106.5300.900.92Pro onlyM C L
M01010*84.4472774171072427.4249.3640.830.88Pro onlyM C L
M0037782.9372873871172119.4458.3320.900.86Pax-4 M C L
M0010183.7872973571271825.2494.6480.910.88CdxA M C L
M0016286.3673074371372626.7049.2650.820.89Oct-1 M C L
M00486*84.6273173971472224.9005.3950.840.86Pro onlyM C L
M0010086.4973373971672216.2694.7060.920.84CdxA M C L
M0010186.4973373971672214.5793.9790.880.86CdxA M C L
M0010086.4973474071772326.2694.0800.920.81CdxA M C L
M0025386.8473574271872524.1313.5310.860.84cap M C L
M00313*86.8473774472072728.4115.6311.000.87Pro onlyM C L
M00314*86.8473774472072728.3245.8230.990.87Pro onlyM C L
M00315*86.8473774472072728.2435.7630.990.87Pro onlyM C L
MA008986.1173874372172615.2645.2640.850.85TCF11-MafGM C L
M00967*84.6274074872373116.5816.3660.850.84Pro onlyM C L
M00963*82.0574174972473227.2125.4050.880.82Pro onlyM C L
MA005573.8174775873074118.4717.3340.830.80MyfM C L
M00624*75.6874875473173725.4916.2340.850.88Pro onlyM C L
M00497*71.0575175873474115.2875.2870.870.87Pro onlyM C L
M00499*71.0575175873474115.4405.4400.880.88Pro onlyM C L
M00500*71.0575175873474114.0924.0920.810.81Pro onlyM C L
M00624*72.9775175773474014.3144.3140.810.81Pro onlyM C L
M0025368.4275275973574224.3984.3980.880.88cap M C L
M00658*68.4275376073674327.8047.8040.870.87Pro onlyM C L
MA008072.2275375873674125.6285.6280.870.87SPI-1M C L
MA009872.2275375873674113.8223.8220.820.82c-ETSM C L
M00624*67.5775476073774325.2955.2950.850.85Pro onlyM C L
MA008167.5775476073774326.2326.2320.860.86SPI-BM C L
M00792*56.4178078876677416.9916.1020.910.87Pro onlyM C L
M0025352.6379380077978613.7043.1530.850.82cap M C L
M0025350.0079680378278915.2563.7150.910.85cap M L
M0010151.3583283881782315.1675.1670.910.91CdxA M C L
M0025352.6383283981782425.2466.6790.910.97cap M C L
M00913*51.2883384181882617.3037.3030.910.91Pro onlyM C L
M00313*52.6383484181982624.3595.5990.800.86Pro onlyM C L
M00314*52.6383484181982624.5045.6240.810.86Pro onlyM C L
M00315*52.6383484181982624.8795.9710.830.88Pro onlyM C L
M0025355.2684485182983612.6935.3310.800.92cap M C L
M00960*50.00901910881890110.2326.7090.960.84Pro onlyM L
M00496*50.0090391088389024.0624.1980.810.81Pro onlyM L
M00499*50.0090391088389027.1904.0260.950.82Pro onlyM L
MA008050.0090390888388814.2494.0450.810.80SPI-1M L
M0025352.6391291989289915.2355.2670.910.91cap M L
MA010352.7891391889389819.2624.6611.000.82deltaEF1M L
M00539*54.009851004975994114.66113.6270.910.89Pro onlyM only
M00539*54.009851004975994214.66113.6270.910.89Pro onlyM only
M00615*54.009851004975994111.62512.7740.870.90Pro onlyM only
M00615*54.009851004975994211.62512.7740.870.90Pro onlyM only
M0023658.709871002977992211.88512.2500.890.90Arnt M L
M0011961.36988100197899117.91010.9550.810.87Max M L
M0011961.36988100197899127.91010.9550.810.87Max M L
M0012161.369881001978991111.54513.4640.900.94USF M L
M0012161.369881001978991211.54513.4640.900.94USF M L
M0012261.36988100197899119.71810.6160.900.93USF M L
M0012261.36988100197899129.71810.6160.900.93USF M L
M00985*61.369881001978991113.60914.3560.930.94Pro onlyM L
M00985*61.369881001978991215.43313.6970.970.93Pro onlyM L
M0005564.299891000979990110.4408.4350.900.85N-Myc M L
M0005564.29989100097999028.37610.4050.850.90N-Myc M L
M0012364.299891000979990110.1158.3630.890.84c-Myc/Max M L
M0022063.41989999979989112.59913.9160.910.95SREBP-1 M L
M00717*60.00989100397999327.3756.8200.820.80Pro onlyM L
M00796*64.299891000979990110.6239.0920.900.86Pro onlyM L
M00796*64.29989100097999027.6529.0850.820.86Pro onlyM L
M00801*58.3398999497998414.8739.0440.820.99Pro onlyM L
M00976*61.5498999797998729.4718.4000.940.90Pro onlyM L
M01008*61.5498999797998728.40510.8530.890.97Pro onlyM L
MA005862.5098999897998818.0519.6210.850.89MaxM L
MA006760.5398999697998614.9988.2250.840.97Pax-2M L
M0007365.85990100098099026.3387.1920.820.84deltaEF1 M L
M0018765.00990999980989110.77010.7700.950.95USF M L
M0018765.00990999980989210.3399.7200.930.91USF M L
M0022065.859901000980990212.12115.1280.900.98SREBP-1 M L
M00322*65.0099099998098916.3267.6370.810.85Pro onlyM L
M00322*65.0099099998098928.1186.3260.870.81Pro onlyM L
M0004165.7999199898198816.5276.5270.810.81CRE-BP1/c-Jun M L
M0004165.7999199898198826.5276.5270.810.81CRE-BP1/c-Jun M L
M0021765.7999199898198819.6459.6450.960.96USF M L
M0021765.7999199898198829.6459.6450.960.96USF M L
M0024064.8699199798198716.7856.7850.850.85Nkx2-5 M L
M00799*64.8699199798198727.7907.7900.890.89Pro onlyM L
M01029*65.79991998981988110.35110.3510.950.95Pro onlyM L
M01029*65.79991998981988210.35110.3510.950.95Pro onlyM L
MA005867.509911000981990210.93011.9260.930.96MaxM L
MA009364.86991997981987210.92310.9230.980.98USFM L
M0024067.5799299898298826.7856.7850.850.85Nkx2-5 M L
M00726*66.6799299798298718.1338.1331.001.00Pro onlyM L
M00726*66.6799299798298728.1338.1331.001.00Pro onlyM L
M00799*67.5799299898298817.7907.7900.890.89Pro onlyM L
M00976*69.23992100098299017.5956.8750.870.85Pro onlyM L
M01008*69.239921000982990110.4049.1300.950.92Pro onlyM L
MA000466.67992997982987110.35110.3511.001.00ARNTM L
MA000466.67992997982987210.35110.3511.001.00ARNTM L
MA000666.6799299798298714.8914.8910.800.80Ahr-ARNTM L
MA000666.6799299798298724.8914.8910.800.80Ahr-ARNTM L
MA009367.57992998982988110.92310.9230.980.98USFM L
MA010366.6799299798298716.1566.1560.880.88deltaEF1M L
MA010366.6799299798298726.1566.1560.880.88deltaEF1M L
MA010466.67992997982987110.53310.5331.001.00n-MYCM L
MA010466.67992997982987210.53310.5331.001.00n-MYCM L
MA006768.42993100098399028.5337.1170.980.92Pax-2M L
MA000266.671000100899099817.4325.6780.850.80AML-1M L
M00539*70.00100110209911010117.39413.8240.960.89Pro onlyM C L
M00539*70.00100110209911010217.39413.8240.960.89Pro onlyM C L
M00615*70.00100110209911010112.27311.6740.890.88Pro onlyM C L
M00615*70.00100110209911010212.27311.6740.890.88Pro onlyM C L
M0011371.4310031014993100417.3796.9640.820.81CREB M C L
M0023671.7410031018993100819.97810.1760.860.86Arnt M C L
M0023671.74100310189931008214.74712.3550.950.90Arnt M C L
M0028572.0910031015993100526.1796.3250.830.83TCF11 M C L
M00916*72.7310031016993100627.8999.5340.810.85Pro onlyM C L
M0011972.73100410179941007111.35611.3520.880.88Max M C L
M0011972.73100410179941007211.35611.3520.880.88Max M C L
M0012172.73100410179941007114.26113.5950.960.94USF M C L
M0012172.73100410179941007214.26113.5950.960.94USF M C L
M0012272.73100410179941007111.75710.2450.960.92USF M C L
M0012272.73100410179941007211.75710.2450.960.92USF M C L
M00917*73.1710041014994100417.8317.9270.830.84Pro onlyM C L
M00985*72.73100410179941007114.36212.7310.940.91Pro onlyM C L
M00985*72.73100410179941007215.33515.7980.970.98Pro onlyM C L
M0005573.8110051016995100618.5809.1910.850.87N-Myc M C L
M0005573.8110051016995100629.7938.4350.890.85N-Myc M C L
M0012373.8110051016995100618.8298.5690.850.85c-Myc/Max M C L
M0012373.8110051016995100628.1466.8410.830.80c-Myc/Max M C L
M0022073.17100510159951005114.15016.0870.951.00SREBP-1 M C L
M00796*73.81100510169951006111.76611.2320.930.91Pro onlyM C L
M00796*73.8110051016995100629.6199.0920.870.86Pro onlyM C L
M00976*71.7910051013995100328.0537.3320.890.86Pro onlyM C L
M01008*71.79100510139951003211.85510.5800.990.96Pro onlyM C L
MA005872.50100510149951004111.41312.4090.950.98MaxM C L
MA006771.0510051012995100217.8326.4160.950.90Pax-2M C L
M0018775.00100610159961005111.7959.7200.980.91USF M C L
M0018775.00100610159961005211.79510.7700.980.95USF M C L
M0022075.61100610169961006213.19113.9160.930.95SREBP-1 M C L
M00322*75.0010061015996100517.8986.3260.860.81Pro onlyM C L
M00322*75.0010061015996100527.8987.6370.860.85Pro onlyM C L
M0004173.6810071014997100416.5276.5270.810.81CRE-BP1/c-Jun M C L
M0004173.6810071014997100426.5276.5270.810.81CRE-BP1/c-Jun M C L
M0021773.6810071014997100419.6459.6450.960.96USF M C L
M0021773.6810071014997100429.6459.6450.960.96USF M C L
M0024072.9710071013997100316.7856.7850.850.85Nkx2-5 M C L
M00799*72.9710071013997100327.7907.7900.890.89Pro onlyM C L
M00981*74.3610071015997100526.1296.1290.800.80Pro onlyM C L
M01029*73.68100710149971004110.35110.3510.950.95Pro onlyM C L
M01029*73.68100710149971004210.35110.3510.950.95Pro onlyM C L
MA005875.00100710169971006210.9309.6210.930.89MaxM C L
MA009372.97100710139971003210.92310.9230.980.98USFM C L
M0024072.9710081014998100426.7856.7850.850.85Nkx2-5 M C L
M00726*72.2210081013998100318.1338.1331.001.00Pro onlyM C L
M00726*72.2210081013998100328.1338.1331.001.00Pro onlyM C L
M00799*72.9710081014998100417.7907.7900.890.89Pro onlyM C L
M00976*74.3610081016998100617.5958.4000.870.90Pro onlyM C L
M01008*74.36100810169981006110.40410.8530.950.97Pro onlyM C L
MA000472.22100810139981003110.35110.3511.001.00ARNTM C L
MA000472.22100810139981003210.35110.3511.001.00ARNTM C L
MA000672.2210081013998100314.8914.8910.800.80Ahr-ARNTM C L
MA000672.2210081013998100324.8914.8910.800.80Ahr-ARNTM C L
MA009372.97100810149981004110.92310.9230.980.98USFM C L
MA010372.2210081013998100316.1566.1560.880.88deltaEF1M C L
MA010372.2210081013998100326.1566.1560.880.88deltaEF1M C L
MA010472.22100810139981003110.53310.5331.001.00n-MYCM C L
MA010472.22100810139981003210.53310.5331.001.00n-MYCM C L
MA006773.6810091016999100628.5338.2250.980.97Pax-2M C L
MA008972.22101010151000100516.0406.0400.880.88TCF11-MafGM C L
M00801*72.22101110161001100626.5589.0440.890.99Pro onlyM C L
MA005655.56102310281013101818.5105.0040.970.81MZF_1-4M L
M0025350.00104410511032103914.7304.9520.890.90cap M C L
M00803*55.56106710721058106325.9215.6580.860.85Pro onlyM C L
M00986*55.56107410791065107025.4304.3460.890.84Pro onlyM C L
MA005655.56107410791065107024.8464.8460.810.81MZF_1-4M C L

BLASTZ

BLASTZ ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      ttttagtagatacaaggtttcaccatgttggtcagcctggtctcgaactcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacgg
              | | | |     ||          |        ||           ||   |   |     ||   ||      |      ||           | 
seq2      ccacattcgtttttttgtggtctgtgtgtttctgctttgagacaaggtctctctacatattgctagctgccccaaagtttgttctgtagaccaggatggc
                  10        20        30        40        50        60        70        80        90       100

                 110       120       130       140       150       160       170       180       190       200
seq1      gcgtgagccaccgcacccggctaatcacggcatttttataagccttgtgatttctgtgattctaatgtttagattctaatgcttagccagggttgagaac
               |  ||| |    |  |      | || |              | |    ||||   |  ||| |  |  |  |    |              | |
seq2      ctcaaatacacagacatcctcctgcttctgcctcaggcctgctagaatcaaagttgtgggacacatggtatgtctgcacacttgtaatgcaccccttagc
                 110       120       130       140       150       160       170       180       190       200

                 210       220       230       240       250       260       270       280       290       300
seq1      caccgatttaatccaatcccttctcctagttttactaaagagaaaactataacctagaatggtgagcaacttgcccaaagtcacccaacatgttagtgca
            | | |          |   |    |  |       | || ||    |        |  ||  ||  |       | ||  |   |    |  || | |
seq2      tccggttacttgtagcgctggtggattcctggccaccatgaaaagcacaaggagcctaggggacagagagagagagagagagagagagagagagagagaa
                 210       220       230       240       250       260       270       280       290       300

                 310       320       330       340       350       360       370       380       390       400
seq1      aggtgcaccgagagagattgtaccagtagcaagaatatgctcatgatgtttataattgttctcgctggagttaatcccggaagcatttctttttagttca
          |      |    |     ||                  | |     |  |  |    |   ||        |       | |   | |  |||   ||  
seq2      acaacagcaataaattgatggtgtttataatttttctagttggaattagtcctggaagcattcctccttagtcggagaagcactgtataatttacctttc
                 310       320       330       340       350       360       370       380       390       400

                 410       420       430       440       450       460       470       480       490       500
seq1      cagaggccttatataaattactttttactttggcacagcacttacgcttctgctaacactgaaatgggttcgcattcctgaccacaaaaggacagagatg
               | |      |  |    || | |   | |  |             | |     |  ||| ||      ||   |   | ||            ||
seq2      actttggcagtagcacttacgcttctgccacgactaaaatgggttcgcattccctgaccacaaaaggacagagatagatctgcgcattcaccactcactg
                 410       420       430       440       450       460       470       480       490       500

                 510       520       530       540       550       560       570       580       590       600
seq1      aaattctacattcacacagcccgccaagttagccaagctccctaggaggctgtctgaagtgcctaaaatgcttctctacaatgatcacccagagctgaga
                    |    |    ||    |      |  |         |     |           |  |  |    ||   |  | | |   |    |   
seq2      cccgcaacattagcaaagctccctagaaggctgcttgaggtgcctaaaatgctgctctacagtgatcacccagagctgagagaacctcggtggagaggtg
                 510       520       530       540       550       560       570       580       590       600

                 610       620       630       640       650       660       670       680       690       700
seq1      gacttcagtggggtagtgagaagaaagagggttgggagagacaggaaagcatcctctccttgagggaaggaactgggaatcaactgagaaccagctagca
                   | ||    |  || ||                |  |  ||      ||           |  | | ||     | ||  |    |  ||  
seq2      agaagacaagagggctgggaaataagagaaagcattctcttctagggagaggaagctgggaatccactgagaatcggccggcattgccaggaggtaaggt
                 610       620       630       640       650       660       670       680       690       700

                 710       720       730       740       750       760       770       780       790       800
seq1      ctgccaggaggtgaggagagggaaggagaataatttaaatgaggccagggagcttctgctccctcaattaaacggtgatagacggcctgacaccaccagc
            |  | |  |              |   | |       ||   ||   |         |         |      |     |   |       | |   
seq2      gagggaaggagaagaatttcaatgagttcagagagcttctgctaccctagtaacagaagtgtagtggacagcatcaggacaccaatcctctcaaaacccg
                 710       720       730       740       750       760       770       780       790       800

                 810       820       830       840       850       860       870       880       890       900
seq1      cctcgaagcctgagatccacaggaaatgttaaaaactggcttggcaatataagtattagaaaatacttcttccaacactcaccaaaaactaagctcccaa
           |    ||     |    |   ||    | |  |         || | |   ||    ||    |     |    | |       ||        ||   
seq2      acagccagagcatgtgaaaactgactcttcagcatgactaaatgcgaaaagtgttcctgactccagaaactgagcctcattagcgaacagctcacccacc
                 810       820       830       840       850       860       870       880       890       900

                 910       920       930       940       950       960       970       980       990      1000
seq1      taaagaacacttcacctgccctccgcaaccctctacctctcttccccgccaagatcttcacccaaggtctcaagagggcggttcccaacctcacgtgaca
           |   | ||   | ||    | |  |          |  |     || |||    |   |  ||  |          |||   |   |     ||     
seq2      aagcaaccaaccctccacttcgctcctttagctcctcaataccaaccaccagatgccaaaagcagagggaggctcttgcgtcacgtgatactgcgatcac
                 910       920       930       940       950       960       970       980       990      1000

                1010      1020      1030      1040      1050      1060      1070      1080      1090         
seq1      cagcggtcacgtgacatggccccggggagccgaggtgagcgttccagcttccggagccggagggggcccggcgtacccagcccccagcccgacgtgacc
            |  | |    |     |||  ||         ||    |   |        | |       | ||||        |    | |  ||          
seq2      gtgacgccttccgggtgagccaaggcatagtccagttcctgcagccttagggaggggtccgccgtgcccacacccagccagactcgacc----------
                1010      1020      1030      1040      1050      1060      1070      1080                   

BLASTZ ALIGNED HITS

No hits found

Run time: 90.5 sec